Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00109 ATGGCTGAAGGAAGAAGCATTGCATTAATGGTATTGTTGTGTATGTTGGTGCTTTATTCTGAGATGGTTTATGCAGAAACCTACGTGGTTGGGGATGCAGCTGGTTGGACCTTTAATAGCAGTCAATGGCCTAATGGAAAGAGTTTTAAGGCTGGAGATGTACTAGAATTCCATTATCCTCCATTGATGCATGACGTGGTGCAAGTGGATGAGTGTGGATACAACACATGCTTTCCTATATTAGGAAGATCAACTTTTCATTTGTCAGGAAATGATCGCATCGTTCTTTCTCAAGGAATGAACTATTTCATCTGCGCCGTTCCTTTTCACTGCCTCCAAGGAATGAAAATGGCAATCAATGCTGCATGA 369 0.4146 MAEGRSIALMVLLCMLVLYSEMVYAETYVVGDAAGWTFNSSQWPNGKSFKAGDVLEFHYPPLMHDVVQVDECGYNTCFPILGRSTFHLSGNDRIVLSQGMNYFICAVPFHCLQGMKMAINAA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00109 122 PANTHER BASIC BLUE-LIKE PROTEIN 5 120 - -
Cca09g00109 122 SUPERFAMILY Cupredoxins 27 121 IPR008972 -
Cca09g00109 122 Gene3D - 23 122 IPR008972 -
Cca09g00109 122 CDD Plantacyanin 27 121 IPR041844 -
Cca09g00109 122 ProSiteProfiles Phytocyanin domain profile. 26 122 IPR003245 GO:0009055
Cca09g00109 122 PANTHER BLUE COPPER PROTEIN 5 120 IPR039391 GO:0009055
Cca09g00109 122 Pfam Plastocyanin-like domain 36 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00109 Cca-Chr9 1923198 1925626 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00109 9 121 Phytocyanin Superfamily AT1G17800 40.336 1.29e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00109 - - gsj:114374467 164.081