Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00099 ATGGCCATAGATGGTTCAAGAACTGATCCTATTGTTCCAACTCACACAAAAGCTTGGTACTACTCTGAACATGGTAGACCAAATGATATTCTCAGGTTAGATCCTAATTGGCTCATACCCCAACTCAAAGACGACCAACTCCTCATCAAGGTCATTGCTGCATCCCTTAATCCCGTTGATTACAAGAGGATGCATGGAGACTTCAAGGACACCGACCCTTATCTACCTACTGTGCCAGGTTATGATGTTGCTGGCATAGTAGTGAAAGTTGGAAGAGAAGTAAAGAAATTTAAGGTTGGGGATGAAGTGTATGGTGATATCAACGAGGCAGGGTTGGAGAACATTAAGATTCTTGGCACTTTGTCAGAGTATACTATTGCAGAAGAGAAACTATTGGCTCATAAACCATCCAATCTAAGCTTCATTGAAGCTGCTAGCATTCCTTTGGCACTTCAAACTGCTAACGAAGGTTTTGAGCATGCTCACTTTTCTGCTGGCCAATCTATCCTTGTTTTGGGTGGAGCTGGTGGAGTTGGAAACTATGTTATTCAGCTTGCCAAACAAGTTTATAAAGCATCTAAGATAGCAGCAACTGCTAGCACCGGGAAGCTCAAACTTTTAAGGGAGTTGGGAGTTGACTTGCCTATTGATTACACAAAGGAAAACTTTGAAGATCTTCCACAAAAATATGATCTAGTGTATGATGCAGTAGGGCAAACTGATAGAGCACTGAAGGCCATAAAGGAAGGTGGGAAAGTTGTGACAATAGCACCACATGCCCAACTTCCACAAGCTATTTTCTTCATCATCACATCCAAGGGATCTACCTTAGACAACTTGAGACCTTACTTTGAGAGTGGTCAATTGAAGCCAATTCTCGATCCAAAGACTCCAGTACCATTTTCTAATGTCATTGAAGCCATTTCCTACTTAGAAACTTCAAGAGCCACAGGAAAAGTGGTCATTTATCCCATACCCTAA 981 0.4179 MAIDGSRTDPIVPTHTKAWYYSEHGRPNDILRLDPNWLIPQLKDDQLLIKVIAASLNPVDYKRMHGDFKDTDPYLPTVPGYDVAGIVVKVGREVKKFKVGDEVYGDINEAGLENIKILGTLSEYTIAEEKLLAHKPSNLSFIEAASIPLALQTANEGFEHAHFSAGQSILVLGGAGGVGNYVIQLAKQVYKASKIAATASTGKLKLLRELGVDLPIDYTKENFEDLPQKYDLVYDAVGQTDRALKAIKEGGKVVTIAPHAQLPQAIFFIITSKGSTLDNLRPYFESGQLKPILDPKTPVPFSNVIEAISYLETSRATGKVVIYPIP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00099 326 Pfam Zinc-binding dehydrogenase 210 322 - -
Cca09g00099 326 Gene3D - 158 273 - -
Cca09g00099 326 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 166 187 IPR002364 GO:0008270|GO:0016491
Cca09g00099 326 SUPERFAMILY GroES-like 16 175 IPR011032 -
Cca09g00099 326 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 11 326 - -
Cca09g00099 326 Gene3D - 23 322 - -
Cca09g00099 326 CDD MDR_like_2 17 322 - -
Cca09g00099 326 Pfam Alcohol dehydrogenase GroES-like domain 45 106 IPR013154 -
Cca09g00099 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 139 267 IPR036291 -
Cca09g00099 326 SMART PKS_ER_names_mod 25 322 IPR020843 GO:0016491
Cca09g00099 326 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 11 326 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00099 Cca-Chr9 1673865 1677695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00099 62 103 Monolignol Biosynthesis Gene Families AT1G72680 52.381 7.13e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00099 K18980 - gmx:100788619 551.592