Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00086 ATGGCAGCCGAATTGGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGATTGCATTTGACAGGCTGGCTTCTCCTCAAGTTTTGGATTTCTTTTGGGGAAGAAAACTTAATGAGATGGTGCTGAGCAAGTTAAAGGTGAAGCTGCGGTCCATCAATGCTGTGGTTGATGATGCAAAACTAAAGCAGATTGAAGATCAAGCTGTGAGAGAATGGCTTTTTGAGGTCAAAGATGTTGTGCATTATGCAGAGGATCTCTTGGATGAAATAGACTACGAACTCATCAAATGCAAAATGGAAGCTGAATCAGAGACTCAAACCTGTACTTGCAAGGTACCCAATTTCTTCAATGCTAGTTTGAGTTCATTTAACAAGAAAATTGACTCAAGGATGAAACAAGTCCTTGGCAAACTAGAATATCTTGCAATCCAAAAGGGTGATCTTGGTTTGAGAGAGGCTACTTATTCTGATGATGGATCAGGTAGTAAAGTGTCACAGAAATTGCCATCGACATCTTTGGTGGTTGAAAGTGTTATTTACGGCAGAAATAATGACAAAGAAATGATTTTTAATTGGCTCACATCTAAAACTGACAATCGTAACCTGCTAACAATACTCTCTATTGTGGGCATGGGTGGGGTAGGAAAGACCACGCTTGCCCAACATGTATACAATGACCCAAGGTTGGAGGAGGCTGATTTTGATATCAAAGCTTGGGTCTGTGTTTCAGATGAGTTTAATGTTTTGACTATAACAAGAGCTATTCTTGAGAAAATCATAAAATCAAAATTTGATGGGGACCTAGAAATGCTTCATGGAAGATTAAAAGAAGAATTGTCAAGGAAGATATTTTTTCTTGTTTTGGATGATGTTTGGAATGAAGACCATGAGAAATGGGAAGCTGTGCAAACTCCTCTTAATTATGGGGCTCCAGGAAGTTCAATTCTTCTCACAACACGAAGTGAGAAAGTTGCTTCCATTGTGCGTTCATGCAAAGTGCATCAACTAAAGCAATTGCAAGAAGAACATTGCTGGGAAGTTTTTTCTAAACATGCATTTCAAGATAATCATCCTCTGTTGGATGATGAGTTGAAGGAGATTGCTACAAAGATAGTTGAAAAGTGCAAAGGATTGCCTTTGGCCTTGAAAACAATGGGAAGTCTTTTACGAACAAAGTCATCTATTGCGGAATGGAATTTGGAGGAACTGCCCTTGAATTTGTATAAACTCACCAATTTGCGTCACCTTGAATTTGTATGTTCTATGGTGAGGAAGATGCCAATGCATTTGGAAAGAATGAAGAATCTTCAAGAATTAAGTTTGTTTTATGTTGGGACAAGTAGTGAGTTTAGCATTCAACAGCTAAGGGGACTCAATCTTCATGGAGGGTTATCAATTAGGGAGCTACAAAATATTGTGAATCCCTCAGATGCATTAATCGCAGATTTTATAAATAAAACACACCTTGAGAGGCTAGAGTTAGAATGGAATCAGAACCACATCCCTAATGATCCAAGGAAAGAAAAGGAAGTACTTGAGAATCTAGAACCTTCCAAACACTTGAAGAATTTGACAATTTGTAATTATGGCGGTACACAATTTCCAAGTTGGTTATTGAATGTGAATGTGGTGTCTTTATGCATGGTGAACTGTAAATATTGCCTTGTGTTGCCACCCTGTGGAGTTTTGCCATTTCTGAAGGAGTTGAAGATTAAAGGGTTTGATGGGATAGTGAGTATTGGTGCTGAATTTTATGGTAGTAACTCTTCTTCATTTTCATCCTTGGAAAGATTGAAATTCTCTAATATGAAGGAATGGGAAGAATGGGAATGTAAAGCTGCTTTTCCTCGTCTTCAACATCTTTCTATAGATGAATTCCCCATGCTGAAAGGTCTTCTAGTTCAACTTCTTCACGTGAAGAATGTAAAAATTCGTAAGTGTGGAAGGCTCAACATTAGTGGATGCAACACTGTATCTAATACTTCTCTTGAAGTGTTGCGCATTTATTCTTGCCCGAATATGAATATTCACATGAGAGGTTGCTACGATTTCCTTTCAACACTGGTGATCTATTGCTCTGACTGTCTAACAACCTTTCCCCTAGATTTCTTTCCAAAACTATGTTCCGTTCAACTCAACCAGTGTCGTAATCTAAAAATGATTTCCCAAGAACACACTCAAACTCATCTTAAGGATATGCAAATTTATCTGTGTCCTCTATTTGAATCATTCCCCAATGAAGGATTATCTGCACCCTATCTAGCGAAAATTGTAATTAGTGGATTGGAGAATTTGAAATTATTGCCTAAAGACATGCATATCCTCCTTCCATCTGTTACTGACCTAATGATAAGGGATTGTCCACAAGTGGAGAAGTTATTGGATGGAGGTTTTCCCCCAAATCTAAAATTCATTGATCTCTATGGTTGCTTCAAACTTATGGCCTCATTGAAAGGGACCTTGGCAGTCAACACCTGTCTTCAGTTGTTGTCTGTTGGAAAAATGGAAGTGGAGTCTTTTCCTGATGAAGGTTTTCTGCCACCCTCTCTTACTTCTCTACGGATCTCGAGTTATCCAGATCTTAAAAAGCTAGACTACAAGGGTCTCAGCCACCTCTCCTTTCTTGAGAAATTGGTGTTTAGTTTCTGCCCTAACCTCCTATACTTACCAGAGGAGGGTCTGCCTAAATCCATTTCAACTTTTGAAATCAAGGGTTGTCCATTGCTCAAAATCCGTTGCCAGAAACCAGAAGGCGAAGAATGGGGAAAGATTGCTCACATTAAAAACCTAAAGATTGACTAA 2799 0.3876 MAAELVGGALLSAFLQIAFDRLASPQVLDFFWGRKLNEMVLSKLKVKLRSINAVVDDAKLKQIEDQAVREWLFEVKDVVHYAEDLLDEIDYELIKCKMEAESETQTCTCKVPNFFNASLSSFNKKIDSRMKQVLGKLEYLAIQKGDLGLREATYSDDGSGSKVSQKLPSTSLVVESVIYGRNNDKEMIFNWLTSKTDNRNLLTILSIVGMGGVGKTTLAQHVYNDPRLEEADFDIKAWVCVSDEFNVLTITRAILEKIIKSKFDGDLEMLHGRLKEELSRKIFFLVLDDVWNEDHEKWEAVQTPLNYGAPGSSILLTTRSEKVASIVRSCKVHQLKQLQEEHCWEVFSKHAFQDNHPLLDDELKEIATKIVEKCKGLPLALKTMGSLLRTKSSIAEWNLEELPLNLYKLTNLRHLEFVCSMVRKMPMHLERMKNLQELSLFYVGTSSEFSIQQLRGLNLHGGLSIRELQNIVNPSDALIADFINKTHLERLELEWNQNHIPNDPRKEKEVLENLEPSKHLKNLTICNYGGTQFPSWLLNVNVVSLCMVNCKYCLVLPPCGVLPFLKELKIKGFDGIVSIGAEFYGSNSSSFSSLERLKFSNMKEWEEWECKAAFPRLQHLSIDEFPMLKGLLVQLLHVKNVKIRKCGRLNISGCNTVSNTSLEVLRIYSCPNMNIHMRGCYDFLSTLVIYCSDCLTTFPLDFFPKLCSVQLNQCRNLKMISQEHTQTHLKDMQIYLCPLFESFPNEGLSAPYLAKIVISGLENLKLLPKDMHILLPSVTDLMIRDCPQVEKLLDGGFPPNLKFIDLYGCFKLMASLKGTLAVNTCLQLLSVGKMEVESFPDEGFLPPSLTSLRISSYPDLKKLDYKGLSHLSFLEKLVFSFCPNLLYLPEEGLPKSISTFEIKGCPLLKIRCQKPEGEEWGKIAHIKNLKID 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00086 932 PANTHER DISEASE RESISTANCE PROTEIN RP 398 748 IPR044974 GO:0006952
Cca09g00086 932 Gene3D Ribonuclease Inhibitor 466 694 IPR032675 -
Cca09g00086 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 399 IPR027417 -
Cca09g00086 932 Gene3D - 35 134 - -
Cca09g00086 932 Gene3D - 337 416 IPR042197 -
Cca09g00086 932 PRINTS Disease resistance protein signature 204 219 - -
Cca09g00086 932 PRINTS Disease resistance protein signature 277 291 - -
Cca09g00086 932 PRINTS Disease resistance protein signature 869 885 - -
Cca09g00086 932 PRINTS Disease resistance protein signature 374 388 - -
Cca09g00086 932 SUPERFAMILY L domain-like 661 924 - -
Cca09g00086 932 SUPERFAMILY L domain-like 396 743 - -
Cca09g00086 932 Gene3D Ribonuclease Inhibitor 725 930 IPR032675 -
Cca09g00086 932 Pfam NB-ARC domain 183 399 IPR002182 GO:0043531
Cca09g00086 932 PANTHER OS05G0414200 PROTEIN 398 748 - -
Cca09g00086 932 PANTHER OS05G0414200 PROTEIN 18 397 - -
Cca09g00086 932 Pfam Rx N-terminal domain 11 103 IPR041118 -
Cca09g00086 932 Gene3D - 160 335 IPR027417 -
Cca09g00086 932 PANTHER DISEASE RESISTANCE PROTEIN RP 18 397 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00086 Cca-Chr9 1494431 1498169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00086 205 398 WRKY Transcription Factor Family AT4G12020 24.519 2.79e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00086 - - gmx:100777280 632.098