Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00084 ATGGCTGAAGGGAGGAAGAGGAGGATACATTTTAGCAAATTGTACAGTTTTTCTTGTTTGAAATCACCATTCAGAGATGGTCATTCCCAAATTGGGAACAAGGGGTACTCAAGGGTTGTCCACTGCAATGATCTGGATAACCCTGAAGCGGTTCAGTTGAATTATGGAGGCAACTATGTTTCAACAACCAAGTACACAGCTTTTAATTTTATCCCCAAGTCTTTGTTTGAACAGTTCAGGAGGGTTGCAAATATCTACTTTCTTGTTGTTGCTTGTGTTTCATTTAGTCCATTGGCGCCTTTTACAGCTCTAAGTATTGTTGCTCCCTTGCTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGAAGAAAGCAGGATATAGAGGCAAACAACAGAAAGGTTCAGGTATATGGTAGAAATTATACATTTGTGGAGACTAGATGGAAGAAACTCCGTGTTGGTGATATCATTAAAGTGTATAAAGATGAATATTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGATGATGGGGTTTGTTATGTTGAGACTATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCATGCCTTGGAGGTGACAATACATCTTCGTGATGAAAAATCTCTCCAAAAGTTTAGTGCTGTGGTTAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTATTGGAACTTTACATTATGATGGTAAAGAATATCCTCTTTCTTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGTGTTGTGATCTTTACTGGCCATGATACAAAAGTTATGCAGAATTCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTCAGTACTTTGATTTTGATATCCTTTATTGGTTCTGTCTTTTTTGGTGTTGAGACCAAAAGGGATATTGGTGCTGGCAGGTATAGAAGATGGTATCTTCGTCCAAACAATACAACGGTGTTTTATGATCCTAGAAGGGCAACACTTGCTGCCATTCTTCATTTTCTGACTGCCCTTATGTTGTATGGATATCTAATTCCGATATCACTTTATGTGTCCATAGAAATTGTGAAAGTTCTGCAGAGCATTTTCATCAACCATGACCAGGAAATGTATTATGAAGAAACAGATAGGCCAGCTCGTGCACGCACATCTAATTTGAATGAGGAACTTGGTCAGGTTGATACAATATTGTGTGACAAAACTGGTACATTGACATGTAACTCCATGGAGTTTGTCAAATGTTCAATAGGGGGCATTCCATATGGTCGTGGTATGACGGAAGTGGAGAAGGCACTTGCTAGGAGAGGAAAAGACAGGGAATCTGAAGTTGATGGTGGATCATCTGATTTCTTGGGCCAGAATAATGAGGCAGTGGACTCTTGGCATCCAATTAAGGGCTTTAATTTTAGAGATGAGCGCATAATGAATGGGCAATGGGTTAATGAACCTTATCCAGACTTCGTACAAAAATTCTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGTAGATAAAGAGTCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTCGCAAGGACACAAACAAGCATATCATTGCATGAATTGAATTATGAAAGTGGAAAAAAGGTTGACAGTAGAGTATACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAAGAATGAGGATAATCATTTGTTGCTCCTTTGCAAGGGTGCCGACAGTGTAATGTTTGAAAGGCTCTCGCAACATGGAAGACAGTTTGAGGCTGAAACCAGAGATCATATCAAACGATATGCTGAGGCTGGTTTAAGAACCCTTGTAATTGCATACCGTGAACTTGATGAAGAAGAATATAAGTTGTGGGACAAGGATTTTTCAAAGATCAAATCATCTGTAACAGAAGAACGAGATGCACTGGTGGATGCAGCTGCTGATAAGATGGAAAAGGATTTGATACTTCTTGGTGCTACTGCAGTTGAAGATAGACTGCAAAAGGGGGTTCCTGAATGTATTGAAAAGCTTGCCCGGGCAAAAATCAAGTTATGGGTATTGACTGGAGACAAGATGGAAACTGCTGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAACAGATAGTGATCACTTTGGATTCTCCAGATATCCTATCCTTGGAAAAACAAGGGGACAAGAACGCTCTAGCAAAGGCCTCTCTTGAAAGCATTAAGATGCAAATTAGAGAAGGAATCTTGCAAATCAAGTCTGCGAAAGAGAGTTCTGATACAAATAAAGGAAGTTCTTCTGGGTTCGGCTTGATAATTGACGGCAAGTCCTTGGATTATTCTCTTAACAAGATTTTGGAAAGGTCCTTCTTTGAGCTGGCAATTAGTTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGAGTTACAAGATTGGTGAAATTGGGGACAGGGAAGACAACATTATCTATCGGTGATGGGGCAAATGATGTTGGCATGCTTCAAGAGGCTGATATTGGAGTTGGTATTAGTGGTGCTGAAGGGATGCAGGCTGTTATGGCAAGTGATTTTGCAATAGCTCAATTCCGGTTTCTGGAGCGTTTGTTGTTGGTACATGGCCATTGGTGTTATCGGCGTATATCCATGATGATATGCTATTTTTTCTATAAAAACATTGCATTTGGATTTACCCTATTTTGGTTTGAGGCATATGCTTCTTTCTCTGGTCAAGCTGCTTACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCCGTAATCGCTCTAGGTGTTTTTGATCAGGATGTTTCTGCCAAACTTTGCCTAAAGTATCCCTTTCTATATCTAGAGGGAGTAGAGGACATCCTTTTCAGCTGGCCCCGGATTCTTGGCTGGATGTTGAACGGAGTCCTTAGTTCTTTAGTGATCTTCTTCTTGACAACTAATTCTGTCTTGAATCAAGCCTTCAGAGTAGATGGTAAGGTGGTAGATTTTGAAATACTGGGGGTCACAATGTACACATGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTTTCTATCAACTACTTCACTTGGATACAGCATTTTTTTATATGGGGCAGCATTGCCTTCTGGTATGTATTTGTGTTAATTTATGGTTACCTCTCTCCAGCCATATCCACAACAGCTTACAGGGTTTTTGTGGAAGCATGTGCTCCAAGTGGTCTATATTGGCTGGGTACTCCTTTGGTTGTTGTGTGTGTGCTTCTACCCTATTTCTCATATAGGTCATTTCAAAGTCGGTTTCTGCCAATGTACCATGATATTATACAGAGAAATCAAGTAGAAGGGATTGAAATTGGCCTATCTGATGATGAGTTACCTAAACAAGTTTCATTTGAAAGGCTGGCTTCTCCTCAAGTTTTGGATTTCTTTCGCCAAAGAAAACATGATGAGATGATGATGAGCAAGCTGAAGGTGAAGCTTCGGTCCATCAATGTTGTGGTTGATGATGCAGAACTAAAGCAGATTGAAAATCAACTTGTGAGAGATTGGCTTTTTGAGGTCAAAGATGTTGTGCATGATGCAGAGGATCTCTTGGACGAAATAAACTATGAACTCTCCAAATGCCATATGGAAGCTGAATCTGAACCTCAAACCATTATTCTTAAGGTTCATATGATGTTGCTAAAAGTGAGGAAGATGCCAATGCATTTGGGAAGACTAAAAACTCTTCAAGTATTGAGTTCGTTTTATGTTGGCAAAAGTTGCGAGTTCAATATTAATCAACTAAAAGGACTCAATCTTCATGGAGGGCTATCAATTGGGGAGCTGCAGAATATTGTGAATCCGGCAGATGCATTTGCTGCGAGTCTTAAAAATAAAACACACCTTGTGCAGCTAAAGTTAGAATGGAATTTGAATCAGATCCCTGATGATACAAGGAAAGAGAAGGAGGTACTTGAGAATCTACAACCTTCCAAACACTTGAAGGATTTGTCAATCAATAACTATGGTGGTACACAATTTCCAAGTTGGTTATCGGATGTGAATGTGGTGTCCTTACGTTTGGAGGACCGTAAATATTGTGTTGTTTTGCCTCCCTTTGGACTTTTGCCATTTCTGAAGGAGCTGATGATTAAAGGGCTTGATGGGATAGTGAGTATTGGTGCTGAATTTTATGGGACTAGCTCTTCTTCATTTACATCCTTGGAAGGATTAGAATTATGCAATATGAAGGAATGGGAAGAATGGGAATGTAAAGCTGCTTTTCCACGTCTTCAATATCTTTCTTTAGATGAATACTCAAGCTGA 4458 0.397 MAEGRKRRIHFSKLYSFSCLKSPFRDGHSQIGNKGYSRVVHCNDLDNPEAVQLNYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLVVACVSFSPLAPFTALSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWKKLRVGDIIKVYKDEYFPADLLLLSSSYDDGVCYVETMNLDGETNLKLKHALEVTIHLRDEKSLQKFSAVVKCEDPNENLYSFIGTLHYDGKEYPLSLQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSTDPPSKRSKIERKMDKIIYILFSTLILISFIGSVFFGVETKRDIGAGRYRRWYLRPNNTTVFYDPRRATLAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINHDQEMYYEETDRPARARTSNLNEELGQVDTILCDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALARRGKDRESEVDGGSSDFLGQNNEAVDSWHPIKGFNFRDERIMNGQWVNEPYPDFVQKFFRVLAICHTAIPDVDKESGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDSRVYQLLHVLEFSSSRKRMSVIVKNEDNHLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYAEAGLRTLVIAYRELDEEEYKLWDKDFSKIKSSVTEERDALVDAAADKMEKDLILLGATAVEDRLQKGVPECIEKLARAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILSLEKQGDKNALAKASLESIKMQIREGILQIKSAKESSDTNKGSSSGFGLIIDGKSLDYSLNKILERSFFELAISCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDILFSWPRILGWMLNGVLSSLVIFFLTTNSVLNQAFRVDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLIYGYLSPAISTTAYRVFVEACAPSGLYWLGTPLVVVCVLLPYFSYRSFQSRFLPMYHDIIQRNQVEGIEIGLSDDELPKQVSFERLASPQVLDFFRQRKHDEMMMSKLKVKLRSINVVVDDAELKQIENQLVRDWLFEVKDVVHDAEDLLDEINYELSKCHMEAESEPQTIILKVHMMLLKVRKMPMHLGRLKTLQVLSSFYVGKSCEFNINQLKGLNLHGGLSIGELQNIVNPADAFAASLKNKTHLVQLKLEWNLNQIPDDTRKEKEVLENLQPSKHLKDLSINNYGGTQFPSWLSDVNVVSLRLEDRKYCVVLPPFGLLPFLKELMIKGLDGIVSIGAEFYGTSSSSFTSLEGLELCNMKEWEEWECKAAFPRLQYLSLDEYSS 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00084 1485 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 670 IPR023299 GO:0000166
Cca09g00084 1485 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Cca09g00084 1485 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 841 957 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca09g00084 1485 Pfam Cation transport ATPase (P-type) 542 631 - -
Cca09g00084 1485 Gene3D - 539 702 IPR023299 GO:0000166
Cca09g00084 1485 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 1152 IPR032630 -
Cca09g00084 1485 Gene3D - 1191 1282 - -
Cca09g00084 1485 SFLD p-type atpase 408 925 IPR044492 -
Cca09g00084 1485 Coils Coil 116 136 - -
Cca09g00084 1485 Pfam E1-E2 ATPase 136 327 - -
Cca09g00084 1485 Gene3D Ribonuclease Inhibitor 1283 1484 IPR032675 -
Cca09g00084 1485 CDD P-type_ATPase_APLT_Dnf-like 57 1034 - -
Cca09g00084 1485 CDD RX-CC_like 1205 1283 IPR038005 -
Cca09g00084 1485 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 1183 - -
Cca09g00084 1485 SUPERFAMILY HAD-like 419 929 IPR036412 -
Cca09g00084 1485 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1151 IPR023298 -
Cca09g00084 1485 SFLD C1.7: P-type atpase like 408 925 - -
Cca09g00084 1485 SUPERFAMILY L domain-like 1283 1481 - -
Cca09g00084 1485 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Cca09g00084 1485 Pfam Rx N-terminal domain 1194 1263 IPR041118 -
Cca09g00084 1485 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1160 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cca09g00084 1485 Pfam Phospholipid-translocating ATPase N-terminal 40 103 IPR032631 -
Cca09g00084 1485 Gene3D - 111 287 - -
Cca09g00084 1485 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 2 1183 - -
Cca09g00084 1485 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cca09g00084 1485 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Cca09g00084 1485 Gene3D - 703 914 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00084 Cca-Chr9 1478996 1492013 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00084 9 1215 Primary Pumps ATPases AT1G68710 62.641 0.0 1603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00084 K01530 - gmx:100817020 2215.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00084 09 1478996 1492013 Cca09g00084 09 1478996 1492013 ECH