Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00071 ATGAAATCTCAAATCCGAAGGGCATGGCATAGTGCAGGTGAAAATTTCgaaagaaagaagagaaataaaaaagaGCTGCTGAAACCTAATCTTATCTACACTCACTCCACCATGGACGGTGATAGCGATTTCACGTTTTGTCAGGTTAGTAAACCTATTGATCTTGAAACAAACAAGCTTGCTTCAGATATTGCCGACATTTCCATCAAAGAAGGATCTTCATATGCAAGTGGTTCTAGTCGGGACACTGTTTTTGTGTGGAAGGATGATTTATCCAATGATTCAAACCCTAAAAAGGAGGCCACAGTTGGTTCTTTGTCTTTCACTGTAACTAACACAGGTTCGTGTCAGCCAAGTGAATCCACTGAGAAATTAGTAGTATCACCAAGTGGGGTCAACAATTTGCCGGTGAAGTCGCCAGGGCAGAGGAATTCTGCCAAGAAGCCGACGGTCCGGGCCAAAGTTCCCTTTGAGAAAGGATATAGTCAAATGGACTGGCTCAAGCTTACCCGGACACATCCGGATCTCGCAGGTTTGAAAGGGCAGTCAAACAAACGACTTATTTCTGTTGATGAAGTTAGAAAGCACCAGACAGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCAGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAACGCTGAATTCTTGTTGGAGAAATGCTTTGTGGGTACCTTAGATGAAGGGCAGTGA 795 0.4189 MKSQIRRAWHSAGENFERKKRNKKELLKPNLIYTHSTMDGDSDFTFCQVSKPIDLETNKLASDIADISIKEGSSYASGSSRDTVFVWKDDLSNDSNPKKEATVGSLSFTVTNTGSCQPSESTEKLVVSPSGVNNLPVKSPGQRNSAKKPTVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISVDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCFVGTLDEGQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00071 264 Pfam Cytochrome b5-like Heme/Steroid binding domain 190 260 IPR001199 -
Cca09g00071 264 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 185 263 IPR036400 -
Cca09g00071 264 Gene3D - 182 263 IPR036400 -
Cca09g00071 264 PANTHER CYTOCHROME B5 DOMAIN-CONTAINING PROTEIN RLF 53 255 - -
Cca09g00071 264 PANTHER FERREDOXIN 53 255 - -
Cca09g00071 264 SMART Cyt_b5_2 188 261 IPR001199 -
Cca09g00071 264 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 216 223 IPR018506 GO:0020037
Cca09g00071 264 MobiDBLite consensus disorder prediction 113 151 - -
Cca09g00071 264 MobiDBLite consensus disorder prediction 113 146 - -
Cca09g00071 264 PRINTS Cytochrome B5 signature 210 220 IPR001199 -
Cca09g00071 264 PRINTS Cytochrome B5 signature 220 234 IPR001199 -
Cca09g00071 264 PRINTS Cytochrome B5 signature 248 260 IPR001199 -
Cca09g00071 264 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 185 261 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00071 Cca-Chr9 1121077 1127186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00071 186 262 NADPH P450 reductases AT1G26340 41.558 2.76e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00071 - - ccaj:109814642 535.798