Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00069 ATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAGTATATCGATGACACAGAAGATTACATAAACATACAGCTTGACAATCACCGAAATCAACTGATTCAGCTAGAGCTCTTCATTAGTGCCGGGACTGTTTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGCATGAACATACCCTATGCATGGAAAACAGGCCATGAACACATGTTTAAATGGGTGGTGATCTTCGGTGGAATGGTTTGTGGATCCTTGTTTATATCCATAGTATCTTATGCACGACGCAAAGGCCTTGTTGGGTCTTGA 318 0.4088 MQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYAWKTGHEHMFKWVVIFGGMVCGSLFISIVSYARRKGLVGS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00069 105 Gene3D Magnesium transport protein CorA, transmembrane region 1 35 - -
Cca09g00069 105 Pfam CorA-like Mg2+ transporter protein 3 91 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca09g00069 105 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 1 105 - -
Cca09g00069 105 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 105 IPR039204 -
Cca09g00069 105 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 41 91 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00069 Cca-Chr9 1078637 1079405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00069 1 78 MRS2 Gene Family AT5G64560 80.769 7.06e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00069 K16075 - ccaj:109809672 215.698