Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00067 atggccaaaattgtagAAGCGTTTGCTCAGAATTCTGGACAGAGTATGTCCCCTTGTGAGGGTAGTCAATCCATACCCAATAAAGGATCAGAGAATGGTGCTGAACAATGGGATGGAAAATTGGATCTTTGGAAACCTTTGAATTGTTTAGTAGAGGTTGCAAGTAGGAGTAAATCTTTTAAGTCTAATGTTCAAGGGTCTGATGGAAAATTAGAAACCATACAAGTAAATGAGAATGACTCTCAAGTGCAGAAAACCAAAAATAAGGAAATTAAGCGTAAGGCAAAAGTTGATGATGAAAAGATTAGCCCTTATCCTGTCTCTTCAGACACAGCAAAACCCAATAAACTGCGCAGAATACGCAAGAAAAAGGAGCCTGCTTCTGGAGAATCAGGCATATCCCCCCAAGCTGTGTTAGATTCTGCCAGCAATAGACTCTTAAGGACTGGTCCAATTTGGTTCTCCTTAGTAGCTTCTGAAAACCAGGAAGGAGATGCACCCTTGCCCCAAATTCCTGCAAGTTATGTGAGAATAAAGTAA 540 0.3944 MAKIVEAFAQNSGQSMSPCEGSQSIPNKGSENGAEQWDGKLDLWKPLNCLVEVASRSKSFKSNVQGSDGKLETIQVNENDSQVQKTKNKEIKRKAKVDDEKISPYPVSSDTAKPNKLRRIRKKKEPASGESGISPQAVLDSASNRLLRTGPIWFSLVASENQEGDAPLPQIPASYVRIK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00067 179 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 179 IPR044807 GO:0004842
Cca09g00067 179 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP2-LIKE 5 179 - -
Cca09g00067 179 MobiDBLite consensus disorder prediction 1 36 - -
Cca09g00067 179 MobiDBLite consensus disorder prediction 83 103 - -
Cca09g00067 179 MobiDBLite consensus disorder prediction 8 31 - -
Cca09g00067 179 MobiDBLite consensus disorder prediction 58 82 - -
Cca09g00067 179 MobiDBLite consensus disorder prediction 58 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00067 Cca-Chr9 1050280 1051074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00067 5 179 C3H Transcription Factor Family AT2G30580 43.503 9.05e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00067 K16277 - ccaj:109807898 329.717