Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00049 ATGAACACGACGCCGTTTATGGACAAGCAGATTATGGATCTCACTCACGGATCTTCCACGAACAAGGACTTCATCGACCTCATGAAGCAAGAGCCTCATCACCATCTTCAAGACGATGAAGAGCAACAAGACCAAGAACAAAAATCATCGCGTGCCAATGGAATCACCAAAGACGACATCCTTCCCAGCTACGATTTCCTACCCATTCGCCCCCCTAATCACGACTCTGCCCCCAATTTCGCTGCCGCATTTTCTCGCCCTTGGAACTCCGATTCCATCTCCCCTCCCCTCGTCAAAAGTTACAGTTCTCTGGATTCAGCAGAACCTGCAAAGGTCATTGTAGAAAAGGACCGAAGTGCTTTTGATGCTACAATGTTGTCTGAGATTGATCGTACCATGAAGAAACATATGGAAAATATGCTTCATGTTCTGGAAGGTGTTAGTGCACGGTTAACACAACTAGAAACCAGAACCCACCATCTTGAAAATTCTGTGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGTAGCACTGATGGAAAATTGAGGCAGCTGGAGAATATTCTTCAAGAGGTGCAATCAGGTGTGCAGACTATCAAGGACAAGCAAGATATAGTGCAAGCTCAGCTGCAACTGGCAAAGCTGCAAGTGTCCAAGACACAGTCAGAAAAGCAACCTAGTGCAATAACTGATCCTGCGCCGCAAGCTGCATCTGCTCCTGTGCAATCTCAGCAACAGCTTCCTACCCCTGCTAATCTTCCACAATCAATACCTGCTGTTCCTCCCCCTAATGCACCTCCACAACAGGGTTTACCAGCTCCAGTTCAAATTCCAAACCAATACTCTCAGAACCAGATTCCAGCTGCCCCCCAGAGAGACACGTACTTCCCACCACCTCAGGAAGCACCAAATCAGCAATACCAACTGCCTTTATCACAGCAGCCACATCCTCAGCCCGTGGCACCGCCACATCAACAATATCAACAGACCCCACATCCCCAGTACCCTCAGCCACCACCTCATCTACCTCAGCAGCAGCCACCATCGCTTCCATCCATGAACCCGCCACAACCACAACTACAATCTTCATTGAGTCACCATGTTGAGGAGCCACCTTATGTTCCTCCTCAGAGTTACCCTCCCAATGCCCGTCAGCCACCATCTCAGTCCCCCAGCGGTCCTCCTCCTCCTCAACAGTTCTACGGGACACCACCCCACACGGCATATGAACCACCATCGAGCAGATCCAGTTCAGGTTACTCTTCTGGTTATGGTACATTATCCAACCCTGGTGAGCAATATCGTTATGGTGGACCACCTCCCTATGGCGGTGCTCCTGCACTAAAACCACAACAATTGCCAACTGCTTCGGTGGCGCCAAGTGGTGCAAGTGGCTACCCTCAGCTCCCAACTGCCAGGCTACTCCCACAAGCAATACCTACTGCATCTGCAGTGAGTGGCAGCTCAGGTTCGGCTGGAACTGGAGGCAGGGTTTCTATTGACGATGTAGTTGACAAAGTTGCTAGTATGGGATTCCCAAGGGATCATGTGAGGGCTACGGTTCGGAAGCTGACAGAGAATGGTCAGGCAGTTGACCTTAATGCAGTGCTGGATAAGCTCATGAATGATGGTGAAGTCCAACCCCCACGAGGTTGGTTTGGTCGGTAG 1671 0.4991 MNTTPFMDKQIMDLTHGSSTNKDFIDLMKQEPHHHLQDDEEQQDQEQKSSRANGITKDDILPSYDFLPIRPPNHDSAPNFAAAFSRPWNSDSISPPLVKSYSSLDSAEPAKVIVEKDRSAFDATMLSEIDRTMKKHMENMLHVLEGVSARLTQLETRTHHLENSVDDLKVSVGNNHGSTDGKLRQLENILQEVQSGVQTIKDKQDIVQAQLQLAKLQVSKTQSEKQPSAITDPAPQAASAPVQSQQQLPTPANLPQSIPAVPPPNAPPQQGLPAPVQIPNQYSQNQIPAAPQRDTYFPPPQEAPNQQYQLPLSQQPHPQPVAPPHQQYQQTPHPQYPQPPPHLPQQQPPSLPSMNPPQPQLQSSLSHHVEEPPYVPPQSYPPNARQPPSQSPSGPPPPQQFYGTPPHTAYEPPSSRSSSGYSSGYGTLSNPGEQYRYGGPPPYGGAPALKPQQLPTASVAPSGASGYPQLPTARLLPQAIPTASAVSGSSGSAGTGGRVSIDDVVDKVASMGFPRDHVRATVRKLTENGQAVDLNAVLDKLMNDGEVQPPRGWFGR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00049 556 Coils Coil 206 226 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 221 254 - -
Cca09g00049 556 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 556 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 374 403 - -
Cca09g00049 556 Pfam UBA-like domain (DUF1421) 501 545 IPR010820 -
Cca09g00049 556 Coils Coil 183 203 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 333 356 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 255 274 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 221 278 - -
Cca09g00049 556 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 556 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 33 53 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 299 315 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 33 59 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 290 465 - -
Cca09g00049 556 PRINTS Proline rich extensin signature 239 251 - -
Cca09g00049 556 PRINTS Proline rich extensin signature 259 275 - -
Cca09g00049 556 PRINTS Proline rich extensin signature 291 303 - -
Cca09g00049 556 PRINTS Proline rich extensin signature 311 332 - -
Cca09g00049 556 PRINTS Proline rich extensin signature 333 349 - -
Cca09g00049 556 PRINTS Proline rich extensin signature 376 401 - -
Cca09g00049 556 MobiDBLite consensus disorder prediction 410 430 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00049 1 273 Trihelix Transcription Factor Family AT5G14540 45.139 3.53e-61 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00049 - - gmx:100778494 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00049 09 786789 792096 Cca09g00049 09 786789 792096 ECH