Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00042 ATGGAGGAGGTGAAAAAGCTCGTTTATCTTCATGGTGCTTTGTGTGAAGCCCTAAGACTTTTCCCTCCCATACCTATTGAACGCAAGCAAGCAATTAAGGCTGACACACTTCCTAGTGGTCACCATGTGAATCCAAATACGATGATATTGTTTTCTTTGTATGCAATGGGGAGGTTTGAAGAGATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAAAGATGGATATATAGAGGAGAGGTTGTTTATGCACCATCTTACAAATTCATTGCTTTTAATGCGGGACCAAGAACATGCTTGGGAAAGGACTTGGCCTTTGTTCAAATGAAGATGGTAGCTGCTGCTATTTTACTCAAGTATCGTTTCCAAGTGGTGGAAGGTCATGTTGCTGCTCCAAGCCATTCAATTGTCCTTCTCATGAAAGATGGTTTGAAAGTTAGGATAACAAAAAGAGAATCAATTTGA 465 0.4043 MEEVKKLVYLHGALCEALRLFPPIPIERKQAIKADTLPSGHHVNPNTMILFSLYAMGRFEEIWGKDCLEFKPERWIYRGEVVYAPSYKFIAFNAGPRTCLGKDLAFVQMKMVAAAILLKYRFQVVEGHVAAPSHSIVLLMKDGLKVRITKRESI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00042 154 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 92 101 IPR017972 GO:0005506|GO:0016705
Cca09g00042 154 Pfam Cytochrome P450 1 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 PANTHER CYTOCHROME P450 1 151 - -
Cca09g00042 154 PRINTS E-class P450 group IV signature 7 23 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 PRINTS E-class P450 group IV signature 58 76 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 PRINTS E-class P450 group IV signature 83 99 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 PRINTS E-class P450 group IV signature 99 117 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 Gene3D Cytochrome P450 1 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 SUPERFAMILY Cytochrome P450 1 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00042 154 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00042 Cca-Chr9 608571 609035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00042 2 151 Cytochrome P450 AT4G39480 59.603 8.84e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00042 - - ccaj:109818137 314.309