Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00038 ATGGCTTTGCTTCTCTACGCAGCCATAttcttcttctccttattatacttcttcAACCGTAGAAGAAGCTGCAAACACCCCCTCTTGAGTGACTACCCTATCCTTGGCATGTTACCACCCGTTCTCTTCAACTTGTGGCGGATCCATGATTTTTTCACTGATATTCTCACAAAACATGGTGGCTCTGGTGAGTTCAAAGGACCATGGTTCACCAAAATGAACTATTTGGTCACTTGTGACTCCCTCAACGTGCAACACATGTTGTGCAAGTGCTTCGATAACTACATGAAGGGACCCGAGTTTCGTGAGATTTTCGAACCCTTCGGAGATGGTGTTGTCACTGCCGATTCAGAAACATGGAAGTACGTTAGAACCCTCCTTCATTCCTTGGTCAAACAAAGGAGGTTCGAAGCGTTTGTCGACCAAACCGTTCAAAACAAGGTTCACGCATGCTTGCTTCCAATACTTGACCATCTGCAACAACAAGGGAAGGTGGTGGATCTTCAAGACGTGTTCAATAGGTTCACATTCGACAACATATGCTCCACAGTTGTAGGGTGTGATCCTATGTGTCTTTCCATCGACTTCCCCGAAGTTGCAATTGAAAGGGCTTTCAATGAGTCAGAAGAGTCCATATTCTACAGACACACAGTGCCAATGAGTGTTTGGAAGTTTCAGAAATGGCTCCAAATAGGTCAAGAGAAGAAGATGACTGAAGCAATCAAAACGTTTGATGAGTTCATATATTCATGCATAACGTCCAAGCGAGAAAAATTAAGCAAGTGTAGCAAAGAAGAAATAGATGAAGCTCCATTTGACTTGCTAACAGCTTTAATCACAGCGGAAAAAGGAGAAAAACGCATGGAGGAGGTGAAAAAGCTAGTTTATCTTCATGGTGCTTTGTGTGAAGCCCTAAGACTTTTCCCTCCCATACCTATTGAACGCAAGCAAGCAATTAAGGCTGACACACTTCCTAGTGGTCACCATGTGAATCCAAATACGATGATATTGTTTTCTTTGTATGCAATGGGGAGGTTTGAAGAGATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAAAGATGGATATATAGAGGAGAGGTTGTTTATGCACCATCTTACAAATTCATTGCTTTTAATGCGGGACCAAGAACATGCTTGGGAAAGGACTTGGCCTTTGTTCAAATGAAGATGGTAGCTGCTGCTATTTTACTCAAGTATCGTTTCCAAGTGGTGGAAGGTCATGTTGCTGCTCCAAGCCATTCAATTGTCCTTCTCATGAAAGATGGTTTGAAAGTTAGGATAACAAAAAGAGAATCAATTTGA 1326 0.4163 MALLLYAAIFFFSLLYFFNRRRSCKHPLLSDYPILGMLPPVLFNLWRIHDFFTDILTKHGGSGEFKGPWFTKMNYLVTCDSLNVQHMLCKCFDNYMKGPEFREIFEPFGDGVVTADSETWKYVRTLLHSLVKQRRFEAFVDQTVQNKVHACLLPILDHLQQQGKVVDLQDVFNRFTFDNICSTVVGCDPMCLSIDFPEVAIERAFNESEESIFYRHTVPMSVWKFQKWLQIGQEKKMTEAIKTFDEFIYSCITSKREKLSKCSKEEIDEAPFDLLTALITAEKGEKRMEEVKKLVYLHGALCEALRLFPPIPIERKQAIKADTLPSGHHVNPNTMILFSLYAMGRFEEIWGKDCLEFKPERWIYRGEVVYAPSYKFIAFNAGPRTCLGKDLAFVQMKMVAAAILLKYRFQVVEGHVAAPSHSIVLLMKDGLKVRITKRESI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00038 441 Gene3D Cytochrome P450 286 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 379 388 IPR017972 GO:0005506|GO:0016705
Cca09g00038 441 PRINTS E-class P450 group IV signature 370 386 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 PRINTS E-class P450 group IV signature 345 363 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 PRINTS E-class P450 group IV signature 294 310 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 SUPERFAMILY Cytochrome P450 16 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 Pfam Cytochrome P450 285 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 Pfam Cytochrome P450 47 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 Gene3D Cytochrome P450 15 285 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00038 441 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 283 - -
Cca09g00038 441 PANTHER CYTOCHROME P450 FAMILY PROTEIN 286 438 - -
Cca09g00038 441 PANTHER CYTOCHROME P450 8 283 - -
Cca09g00038 441 PANTHER CYTOCHROME P450 286 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00038 Cca-Chr9 511495 512996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00038 22 437 Cytochrome P450 AT1G65340 37.815 1.94e-108 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00038 - - gmx:100780625 738.028