Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02797 ATGGAAGAGTTTGATTACGAAGAGATAGTGAAAGCAACAGAAAACTTCAACCCTAGAAAGATGATAGGCAAAGGAAGCCATGGCATGGTCTACAAAGGCGTTGTGTTGAAAGATAACATCAAGAGATTGGTGGCTATAAAGAAACCCTCCCAAGGCCTTCAATCTCTTCACGACAACTCCAAGCTCGAAAACGAAATCCGAGTTCTATCCTCTCTAGGCCAAAACCCTAACGTGGTTAATCTTCTAGGCACTACTAGTACTAGCTATGAGCAGAAAGTGATTGTGATGGATCTCATGCCCAATGGCACCCTCCATGACATGCTCCATGTTAATAAAACTCCACCCACGTGGCATAAACGCGTTGAAATCGCCATGCAAATCGCTCGTTCGGTGCAGTTTCTTCACGAAGGGAAGCCTGTGGTGATCCACAGAGACATAAAGTCTTCCAACATATTGTTCGATTCCCAATGGAACGCAAAGTTGGCGGATTTTGGACTCGCGGTGAAAGGGGTTGACTCAGTGAGTCAACCCGCCGGTACGATAGGGTATCTGGACCCGTGTTACACCACCCCAGATAAACTGAGCACGAAAAACGACATGTTCAGCTTGGGTGTGGTTTTGTTGGAGATCGTAAGCGGAAGAAAGGCCATGGATGTGTGCAAAACGCCGGCTTCGGTTGTGGAGTGGGCGATTGGGTTAATGGAGGAACATGTTACGATGAAAATTTGTGACACGAGAGTAGCAGTGCCCAGTAACATGGTTGGCACGATCTCTCAGTTGGTACGATGTGCCGCACGTTGTGTGTCGGAAAATGAAGACGAAAGGCCTTCGGCAAGGGATGTTGTTTTGGGAATGGAAAGTTGTTTGGTGGAAGGAGTGAGGTTTCTTCCCCTTTGGAGATGCGTTTTGGTGTGGTTGAGGAAGAAGAAGAGGAAGCTTATCATGAGTATTGGTGCAAACAGGCAGAGAAGGATTCGGTGTATAGCACaagaagaagaagaagaagaagaGGGTGAGGGAGATGCTGCTGTTTCCATGACCATAAAGCAAGTTTTGGCCGAGTCTGATTCGATCAGGCATGCACTACTAACATTCGTACCAAGCCAAAGGTGA 1113 0.4636 MEEFDYEEIVKATENFNPRKMIGKGSHGMVYKGVVLKDNIKRLVAIKKPSQGLQSLHDNSKLENEIRVLSSLGQNPNVVNLLGTTSTSYEQKVIVMDLMPNGTLHDMLHVNKTPPTWHKRVEIAMQIARSVQFLHEGKPVVIHRDIKSSNILFDSQWNAKLADFGLAVKGVDSVSQPAGTIGYLDPCYTTPDKLSTKNDMFSLGVVLLEIVSGRKAMDVCKTPASVVEWAIGLMEEHVTMKICDTRVAVPSNMVGTISQLVRCAARCVSENEDERPSARDVVLGMESCLVEGVRFLPLWRCVLVWLRKKKRKLIMSIGANRQRRIRCIAQEEEEEEEGEGDAAVSMTIKQVLAESDSIRHALLTFVPSQR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02797 370 Pfam Protein kinase domain 19 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02797 370 PANTHER - 1 316 - -
Cca08g02797 370 PANTHER OS01G0750732 PROTEIN 1 316 - -
Cca08g02797 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cca08g02797 370 SUPERFAMILY Protein kinase-like (PK-like) 3 295 IPR011009 -
Cca08g02797 370 ProSitePatterns Protein kinases ATP-binding region signature. 22 48 IPR017441 GO:0005524
Cca08g02797 370 ProSiteProfiles Protein kinase domain profile. 16 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02797 370 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Cca08g02797 370 Gene3D Transferase(Phosphotransferase) domain 1 99 292 - -
Cca08g02797 370 SMART serkin_6 16 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02797 Cca-Chr8 62341924 62343356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02797 4 291 Receptor kinase-like Gene Family AT3G59420 39.933 4.39e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Cca08g02797 Pkinase 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02797 - - lang:109334080 406.757