Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02785 atggagtatgcagctggtggagagctcttcgagcgaatttgcagtgctggaagattcagtgaagatgaggctcgatatttcttccagcagctcatctcaggagttagctactgtcattccatgCAAATCTGCCATCGAGACTTGAAGCTGGAGAACACCTTATTGGATGGCAGCCCTGCCCCGCGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCCCTGCTTCATTCTAGGCCTAAGTCAACAGTGGGAACTCCAGCCTACATTGCACCTGAGGTTCTTTCACGTAGAGAGTATGATGGAAAGTTAGCAGATGTATGGTCATGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAAGATCAGGAGGATCCCAAAAATTTTAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGCAGACATCTGCTATCTCGCATTTTTGTGGCAAATCCAGTTAGGAGAATCACCATTAAGGAAATCAAGTCCCACCCATGGTTTTTAAAGAACTTGCCTAGAGAATTAACAGAAGTAGCTCAAGCTGCCTACTACAGAAAAGAAAACCCAACCTTTTCTCTTCAGAGTATAGAAGACATCATGAATATTGTTGAGGAGGCCAAGAGTCCACCTCTGGCATCCAGGTCAATCGGAGGATTTGGCTGGGGaggagaagaagaagaggatgaaacaaaagaagcagaggctgagcccgaagaagatgagtatgaaaagaGAGTCAAGGAGGCACAGGCAAGCGGTGAATTTCATGTCAGTTAA 828 0.3382 MEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPVRRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEDIMNIVEEAKSPPLASRSIGGFGWGGEEEEDETKEAEAEPEEDEYEKRVKEAQASGEFHVS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02785 275 MobiDBLite consensus disorder prediction 239 254 - -
Cca08g02785 275 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02785 275 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02785 275 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
Cca08g02785 275 MobiDBLite consensus disorder prediction 228 275 - -
Cca08g02785 275 Gene3D Transferase(Phosphotransferase) domain 1 1 229 - -
Cca08g02785 275 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 1 269 - -
Cca08g02785 275 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02785 275 PANTHER SERINE/THREONINE KINASE 1 269 - -
Cca08g02785 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02785 Cca-Chr8 62254394 62257607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02785 1 234 CBL-interacting serine-threonine protein kinases AT1G30270 39.834 4.93e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Cca08g02785 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02785 K14498 - gmx:100812259 502.286