Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02740 ATGGCCAAGGAAAGAGGCATTGGTGCAGTGTCAGTGATAGTATTTTGTATGTTGATGCTTTATTCTGAGATGGCTCATGCAAGCACTTACGTGGTTGGAGGTAGAACTGGTTGGACCTTTAACATGACTGCTTGGGTCAAAGGGACCTACAAGGCTGGTGATAAATTATTATTCTACTATAATGCTACGCAACACAACGTGGTGATGGTGGACGAGGCTGGATACAATTCGTGCACTGCTTCAAAAGGATCAAAAACGTATCAGTCAGGACGTGATTACATTGAGCTTGCTAAGGGATCAACTTACTTCATTTGCACTTTTCCTGGTCACTGCCAAGATCATGGGATGAAAGTTGCAGCTCTTGCTGTATAA 372 0.4328 MAKERGIGAVSVIVFCMLMLYSEMAHASTYVVGGRTGWTFNMTAWVKGTYKAGDKLLFYYNATQHNVVMVDEAGYNSCTASKGSKTYQSGRDYIELAKGSTYFICTFPGHCQDHGMKVAALAV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02740 123 Gene3D - 28 121 IPR008972 -
Cca08g02740 123 PANTHER BLUE COPPER PROTEIN 9 120 IPR039391 GO:0009055
Cca08g02740 123 SUPERFAMILY Cupredoxins 29 118 IPR008972 -
Cca08g02740 123 CDD Plantacyanin 29 119 IPR041844 -
Cca08g02740 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Cca08g02740 123 PANTHER BASIC BLUE-LIKE PROTEIN 9 120 - -
Cca08g02740 123 Pfam Plastocyanin-like domain 38 112 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02740 Cca-Chr8 61832631 61833401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02740 9 123 Phytocyanin Superfamily AT1G17800 36.364 7.04e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02740 - - jre:109007045 146.362