Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02733 ATGAGTGGGGAAATAGAGTTAGAGGTTGAGGTGGTAGACACAAAATGCATAAAACCATCCACACCCACACCCCCACACCTCAAAACCTTCAAACTCTCTCTACTGGACCAGCTTTCCCCTAACATCCATGGCAACATCACCCTCTTCTACCCTCGCACTCACACAAACACACTTCACTTCCACGCCAAATCCCAACTCCTTCAAACCTCCCTCTCCCAAACCTTAACCCGCTTCTACCCCCTCGCCGGACGCCTCCACAACGCCGCCACCGTCCACTGCAACGACCACGGCGCCACCTTCATCCAAACCCGAACCCACGCCACCCTCTCCGACATCCTCACACCCCCAAACTTCCACACCCTCCAACGCCTCCTTCCATCTTCCCACGACCAAACCCTAACAACCTCATCATCAAACGCTCCCATTCTCCTCGTCCGCTTCACCTCCTTCCGCTGCGGCGCCGTCGCTCTCACCATTTCTCTCTCTCACAAGATCGCCGACATAGCCGCCCTCGTCGCTCTCCTCCAAACATGGAccgccgccttcaccgccgccaccgcgcctcctctccccgaactcggcgccggcgccgcTCTCTTCCCTCCGAGAGACATTCCCGGCGTGTCCGCTTCCGTGAAAACCGTCTCCTCCCAGAAGTTTACTTCCACAAGGCTCGTTTTCGACGCCTCCAAGGTTAGAGAGCTAAAGGACAAAGTGAAAAGCGCGCTCGAAGTTCGAGGACACGAAGGTTCCGTGTTTGAGCCTTCGAGAGTGGAGGTTGTTCTGTCGCTCATTTGGAAATGCGCCTTGTCGGCTTCTCGCTCCAAAACGGCGTCGTTCACGCGTTCGGTTATGTTCCAGGCGGTGAACCTCCGTCCCCGGATGGATCCAGCGGTGGCGGACGCCGCCGTGGGAAACTTCGTGTGGCCGTTCGTGGTGACGGCGGAGGAGGAAGGGCACGTGGAGCTGCACGTGCTGGTGAGGAGGATGAGGGAGAGTATGAGGGAGTTTTTGGAGACGAAGGCAGAGAGGTTCAAAGAGGGTGGTGGTTTTGGAGTGGTGATGGAGAGTTTGAAGGAGAGGGGTGAAGTTAGCAAAAAGGGTGGTGTGGTTTATAAGTGTTCGAGTTGGTGTAAGTTTCCACTGCTTAAGGTTGATTTTGGTTGGGGTGAGCCTGTGTGGACGTGCAGTGTCAATAATATTGTGAGTAACACCATTGCTTTGATGGATACTAAAGATGCTGCTGGGGTTGAAGCTTTTGTCACTCTTGATCACCATGAAATGGATCTCTTTCAACAACACCACGAGCTGTTGCATTATGCTTTCATTAACCCTACTCTTATACTCTGA 1350 0.5111 MSGEIELEVEVVDTKCIKPSTPTPPHLKTFKLSLLDQLSPNIHGNITLFYPRTHTNTLHFHAKSQLLQTSLSQTLTRFYPLAGRLHNAATVHCNDHGATFIQTRTHATLSDILTPPNFHTLQRLLPSSHDQTLTTSSSNAPILLVRFTSFRCGAVALTISLSHKIADIAALVALLQTWTAAFTAATAPPLPELGAGAALFPPRDIPGVSASVKTVSSQKFTSTRLVFDASKVRELKDKVKSALEVRGHEGSVFEPSRVEVVLSLIWKCALSASRSKTASFTRSVMFQAVNLRPRMDPAVADAAVGNFVWPFVVTAEEEGHVELHVLVRRMRESMREFLETKAERFKEGGGFGVVMESLKERGEVSKKGGVVYKCSSWCKFPLLKVDFGWGEPVWTCSVNNIVSNTIALMDTKDAAGVEAFVTLDHHEMDLFQQHHELLHYAFINPTLIL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02733 449 Gene3D - 6 207 IPR023213 -
Cca08g02733 449 Pfam Transferase family 8 437 - -
Cca08g02733 449 PANTHER F21J9.9 6 448 - -
Cca08g02733 449 Gene3D - 217 442 IPR023213 -
Cca08g02733 449 PANTHER VINORINE SYNTHASE-RELATED 6 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02733 Cca-Chr8 61770243 61771913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02733 7 394 Monolignol Biosynthesis Gene Families AT5G48930 22.664 1.12e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02733 - - gmx:100808502 608.986