Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02725 ATGAATTACGAAGCTGACACTAACATGACTGATTTGATGACTATCACACGCTTTGTTCTGAATGAACAGTCAAAGTATCCTGAATCACGTGGCGATTTCACCATCCTTCTCAGTCATGTCGTTCTTGGCTGCAAATTCGTTTGTTCTGCTGTTAACAAGGCAGGACTGGCAAAACTCTTAGGACTTGCTGGAGACACCAATGTTCAAGGTGAGGAGCAAAAGAAATTGGATGTGCTTTCAAATGAAGTATTTGTGAAAGCCTTAATCAGCAGTGGACGCACATGCCTACTTGTTTCTGAAGAGGTTGAAGAGGCTATATTTGTGCCACCATCACATCGTGGCAAATACATTGTTGTGTTTGATCCTTTGGATGGATCCTCAAACATTGACTGCGGGGTTTCTATTGGAACTATCTTTGGTATTTACATGGTGAAGGATGAGACTAAAGTTAGTCTTGAAGATGCATTGCAACCTGGGAACAAATTGTTAGCAGCTGGTTACTGCATGTATGGAAGCTCTTGCACGTTTGTGCTTAGCACAGGAAATGGTGTGAATGGTTTTACACTTGATCCTAGCCTGGGGGAGTTCATATTGACTCACCCAAACATCAAGATACCAAGGAAAGGAAAGATTTATTCGGTGAATGAAGGAAATGCCAAAAACTGGGATGAACCGACCACCAAATATGTACAAAAATGCAAGTTTCCTCAAGATGGTTTACCACCTAAATCTCTTAGGTACATCGGAAGTATGGTTGCTGATATCCATCGAACTTTGCTTTATGGTGGTATCTTCATGTACCCTGCTGATATAAAGAGTCCAAACGGAAAGCTACGACTTCTCTACGAAGTCTTTCCAATGTCATTTTTGATGGAGCAAGCAGGAGGTCAGGCTTTCACAGGAAAACAACGGGCTCTTGACTTGGTTCCAAAACAAATACATGAACGATCATCAATATTCCTTGGCAGTTACGATGACATCGAGCAAATGAAAGAGCTTTATGCCGCAGATGGTGCATGA 1020 0.4186 MNYEADTNMTDLMTITRFVLNEQSKYPESRGDFTILLSHVVLGCKFVCSAVNKAGLAKLLGLAGDTNVQGEEQKKLDVLSNEVFVKALISSGRTCLLVSEEVEEAIFVPPSHRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYMVKDETKVSLEDALQPGNKLLAAGYCMYGSSCTFVLSTGNGVNGFTLDPSLGEFILTHPNIKIPRKGKIYSVNEGNAKNWDEPTTKYVQKCKFPQDGLPPKSLRYIGSMVADIHRTLLYGGIFMYPADIKSPNGKLRLLYEVFPMSFLMEQAGGQAFTGKQRALDLVPKQIHERSSIFLGSYDDIEQMKELYAADGA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02725 339 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Cca08g02725 339 Gene3D - 204 338 - -
Cca08g02725 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE PROTEIN 3 336 - -
Cca08g02725 339 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Cca08g02725 339 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Cca08g02725 339 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Cca08g02725 339 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Cca08g02725 339 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Cca08g02725 339 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Cca08g02725 339 PIRSF FBPtase 9 338 IPR028343 GO:0042132
Cca08g02725 339 Gene3D - 4 203 - -
Cca08g02725 339 SUPERFAMILY Carbohydrate phosphatase 8 334 - -
Cca08g02725 339 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Cca08g02725 339 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Cca08g02725 339 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Cca08g02725 339 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 336 IPR000146 GO:0005975|GO:0016791
Cca08g02725 339 PIRSF FBPtase_SBPase 9 338 IPR000146 GO:0005975|GO:0016791
Cca08g02725 339 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02725 Cca-Chr8 61610246 61613804 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Cca08g02725 FBPase 1.1e-78 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02725 K03841 - gmx:100797157 627.861