Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02699 ATGAGTCAGCGTGTGAGTGACGAGATTGTGGCAAAGGCCATGGAAGAAATAAGAAGTGGAGCTTCTTCAGGTAGACATGGAAATACTTTACCTCATGTTTACAAGGTTGGAGCTCCTCCTAAGCAGACACTTTGGCAAGAGATCAAACATTCTGTTGTTGAAACTTTCTTCTCAGACAAACCCTTTGAAAAATTTAAGGACCAAACTGCCTCTGCAAAGTTTTTTTTAGGCCTCCAATATGTCTTCCCCATTTTTGACTGGTCAAGGAACTACAATCTTAAAAAATTCAGAGGTGATCTCGTTTCTGGACTCACCATTGCAAGTCTGTGTATCCCTCAGGACATTGCATACGCAAAGCTTGCAAATTTGGATCCCCAATATGCACTATACACGAGTTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGAACTATGCTATCTGATGAGATCAGTGACTACCATAGTCATGAATACCTGCGTCTTGCATTCACTGCCACCTTCTTTGCAGGAATCACTCAAATGGCACTTGGCGTTCTAAGGCTTGGTTTTCTGATTGACTTTTTGTCTCATGCTGCCATTGTGGGATTCATGGGTGGAGCTGCCATTACTATTGCACTGCAACAGCTTAAGGGTCTGCTTGGCATACAAAAGTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGATCGGTTTTCAATTCAGCACACCATGGGTGGAATTGGCAGACAATAGTCATTGGATTAGCATTCTTGGCTTTCCTTCTTACAACCAAGTATATTGCTAAGAAGAATAAGAAATTCTTTTGGGTGGCTGCAATTTCTCCTATGATCTCTGTCATACTGTCTACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGCGTGTCAATTGTGAGACATGTTAAGAAGGGTGTGAATCCATCATCTGCTAGTGAGCTTTATTTAAGTGGAAAATATCTAGGCGCCGGTATTCGGATTGGTGTGGTATCTGGTATGGTAGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGGTGGCAATGGGAGCAATGAACATTGTTGGTTCACTAACATCTTGTTATGTGGCCACAGGATCTTTTTCTCGCTCAGCAGTGAACTTCATGGCTGGTTGCAGAACTGCTGTTTCAAACATTGTTATGTCCATGGTTTTGTTATTAACACTGTTACTCATCACGCCACTATTCAAGTACACTCCAAACGCGGTGCTTGCTTCTATTATTATAGCTGCTGTGCTTGGCCTAGTGAACGTTGATGCAGCTATTCTGCTTTGGAAGATTGACAAATTCGATTTTGTTGCATGCATGGGAGCCTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTGGGTATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGAACGGCAGTGTTAGGGAAACTTCCAGGGACTACTGTTTATAGGAACATCCAACAATACCCCAAAGCCACCCAAATTAATGGCATACTGATTGTCAGGGTTGACTCTGCTATTTACTTCTCCAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGACAGATGAAGAAGCCCAAAGGACAACAAGTGGCTTGTCTAGAATAGAGTATCTCATCGTTGAAATGTCACCTGTTACTGACATTGACACAAGTGGCATCCATGCCTTTGAAGAGTTATACAAGAGCCTTCAGAAAAGGGAGGTCCAGCTTATGTTGGCAAACCCGGGGCCAGTTGTGATGGAGAAGCTCGACGCATCCAAGTTAACAAACTTAATTGGGGTAGATAAAATATTCCTAACAGTGGCTGATGCTGTTTCAACTTTTGGTCCAAAGGGTGAAGGTGTAGTATGA 1977 0.4259 MSQRVSDEIVAKAMEEIRSGASSGRHGNTLPHVYKVGAPPKQTLWQEIKHSVVETFFSDKPFEKFKDQTASAKFFLGLQYVFPIFDWSRNYNLKKFRGDLVSGLTIASLCIPQDIAYAKLANLDPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTMLSDEISDYHSHEYLRLAFTATFFAGITQMALGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGLLGIQKFTKKTDIVSVMRSVFNSAHHGWNWQTIVIGLAFLAFLLTTKYIAKKNKKFFWVAAISPMISVILSTFFVYITRADKKGVSIVRHVKKGVNPSSASELYLSGKYLGAGIRIGVVSGMVALTEAVAIGRTFAAMKDYSLDGNKEMVAMGAMNIVGSLTSCYVATGSFSRSAVNFMAGCRTAVSNIVMSMVLLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNVDAAILLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVGISFAKILLQVTRPRTAVLGKLPGTTVYRNIQQYPKATQINGILIVRVDSAIYFSNSNYIKERILRWLTDEEAQRTTSGLSRIEYLIVEMSPVTDIDTSGIHAFEELYKSLQKREVQLMLANPGPVVMEKLDASKLTNLIGVDKIFLTVADAVSTFGPKGEGVV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02699 658 Pfam STAS domain 528 646 IPR002645 -
Cca08g02699 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Cca08g02699 658 Gene3D STAS domain 507 651 IPR036513 -
Cca08g02699 658 TIGRFAM sulP: sulfate permease 83 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca08g02699 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Cca08g02699 658 PANTHER SULFATE TRANSPORTER 18 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca08g02699 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Cca08g02699 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 655 - -
Cca08g02699 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02699 Cca-Chr8 61387843 61392236 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02699 22 653 Inorganic Solute Cotransporters AT1G22150 73.302 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02699 K17470 - gmx:100784124 1117.06