Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02697 ATGGATGTTCTAACTCTAAGCTCAAGTCTTAATATTTCCAAGCCATTTAACTTCCTTCCACTCTCTAAGAACCACCAAAAACATCCTCGTACGCAATTTTCTGTTTCATGCGTAGCCACGAAGCAGCATGGAGGTGTTGATGAAAACTTGTACTCGATACTTTCTTTGAGCCCCAACAGTGCAAGCATGGATGACATAAAGAAGGCGTATAGATCAATGGCGCTTCGGTACCACCCTGACGTGTGTCGTGATGGTTCCAAGAAAGAGGAACAAACGAGGATGTTTGTGCAACTCAACGCAGCTTATGAGACGTTGTCGAATCCGAGGCTTCGAGAAGAGTATGACTATGAATTGGGTTTGAGAAGTAAAATGAGTGTTGGTGATGAGAGTTGGAGAATTAGGTGGAGGGAGCAAGTATCTGAGTTGAAGAGAAGATCTCGTAAACGTGTGGCACGAAAAGAGGCTTCGTCGTGGGCTAGTAGAATAAGGGTGCAAAACATGAAATGA 507 0.4398 MDVLTLSSSLNISKPFNFLPLSKNHQKHPRTQFSVSCVATKQHGGVDENLYSILSLSPNSASMDDIKKAYRSMALRYHPDVCRDGSKKEEQTRMFVQLNAAYETLSNPRLREEYDYELGLRSKMSVGDESWRIRWREQVSELKRRSRKRVARKEASSWASRIRVQNMK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02697 168 Pfam DnaJ domain 49 115 IPR001623 -
Cca08g02697 168 ProSiteProfiles dnaJ domain profile. 49 118 IPR001623 -
Cca08g02697 168 SUPERFAMILY Chaperone J-domain 43 114 IPR036869 -
Cca08g02697 168 CDD DnaJ 49 107 IPR001623 -
Cca08g02697 168 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 168 - -
Cca08g02697 168 SMART dnaj_3 48 110 IPR001623 -
Cca08g02697 168 Gene3D DnaJ domain 36 153 IPR036869 -
Cca08g02697 168 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Cca08g02697 168 PRINTS DnaJ domain signature 52 70 IPR001623 -
Cca08g02697 168 PRINTS DnaJ domain signature 70 85 IPR001623 -
Cca08g02697 168 PRINTS DnaJ domain signature 90 110 IPR001623 -
Cca08g02697 168 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 3 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02697 Cca-Chr8 61377249 61377843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02697 51 115 C2H2 Transcription Factor Family AT1G74250 41.791 9.10e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02697 - - gmx:100783590 230.335