Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02693 ATGGCAGCTGCAACATCTGGTGCTGTGGTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCACTGCTATCGGAGGCAAAGTTGGTGCTGCTGTCAGTCCCAGAAGACTCATTGTGGTAGCTGCTGCTGCACCAAAGAAGTCATGGATCCCTGGTGTTAGAGGTGGTGGGAATTTCATTGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTACGGTTTTGACCCACTAGGGCTTGGCAAGGACCCAGCATTCCTGAAATGGTACAGAGAAGCTGAGCTGATTCACGGAAGGTGGGCAATGGCTGCAGTTGTAGGCATCTTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCCAATGCCATTGCTCCTTTCTCCTTTGGTTCTCTTTTGGGAACCCAATTGATTCTCATGGGGTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCCACTGGTGAGCAAGGCTACCCTGGAGGCAAATTCTTTGACCCTTTGGGCTTTGCTGGCACTCTCAAGGATGGAGTTTACATCCCTGACACTGAGAAGCTGGAAAGATTGAAACTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGCTCATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGCGCTCTTGGCTTGTAA 777 0.5161 MAAATSGAVVNGLGSSFLSGGNRSQTLLATAIGGKVGAAVSPRRLIVVAAAAPKKSWIPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02693 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Cca08g02693 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Cca08g02693 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Cca08g02693 258 SUPERFAMILY Chlorophyll a-b binding protein 69 258 - -
Cca08g02693 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02693 Cca-Chr8 61347703 61348869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02693 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 81.923 6.07e-154 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01481 09 38135424 38136888 Cca08g02693 08 61347703 61348869 PCT