Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02691 ATGAATGCATGGCAGGAGATTGCATACTCAAAGCTTGCCTCAAGGCGCGTTGCCATAGGACCCGTTGCTGTGGTGTACCTCTTGCTTGGGACTATGCTATCTGAAGAAATTAGTGACTACCATAGTCATGAATACCTGCGTCTTGTATTTACTGCCACCTTCTTTGCAGGAATCACTCAAATGGCACTTGGTCTTCTAAGGCTTGGTTTCCTGCTTGATTTTTTGTCTCATGCTGACATTGTGGGATTCATGGGTGGAGCTGTCATTACTATTTCTCTGCAACAACTGAAGGGTCTGCACGGCATACAAAAGTTCACTAATAATTTACTCATTATCCATTAG 342 0.4357 MNAWQEIAYSKLASRRVAIGPVAVVYLLLGTMLSEEISDYHSHEYLRLVFTATFFAGITQMALGLLRLGFLLDFLSHADIVGFMGGAVITISLQQLKGLHGIQKFTNNLLIIH 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02691 113 Pfam Sulfate permease family 13 108 IPR011547 GO:0016021
Cca08g02691 113 PANTHER SULFATE TRANSPORTER 13 109 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca08g02691 113 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 13 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02691 Cca-Chr8 61340984 61342257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02691 13 112 Inorganic Solute Cotransporters AT1G78000 70.297 1.43e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02691 K17470 - gmx:100784124 141.354