Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02689 ATGGAGGGTGGTTTGTGGAACAAAGAGTTGCTGATTTTAAAGTTCGTTTTGCTTGCTGTGGCTGTTGTGAAGACAGTGCATGGCAAGGGCACCTATGTAGGGTTCTATTCTGGAACATGTCCACGTGCCGAGTCCATAGTTAGGTCCACAGTTGAATCTTACGTTAGGTCTGACCCTACTTTAGCAGCAGGGATACTTCGGATGCACTTCCATGATTGCTTTGTGAGAGGTTGTGACGGTTCTGTCCTTATTGCTGGCTCTGATACCGAGAGATCAGCGGGGCCAAACCGTAATTTGAGAGGCTACGAGGTCATTGATGCTGCAAAGGCAAAACTCGAAGCTGTGTGCCCTGGTGTTGTGTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGTGATTCTGTAGTTTTGAGTGGTGGACTAAGTTGGCAAGTGCCCACAGGACGCAGAGATGGAAGAGTTTCAATTGGAACTGAAGCCTTCACTTTGCCTGGTCCTAATGATACAGTTGCAGTGCAGAATAAGAAGTTTTCTGATAAGGGCCTTAACACTCAAGATCTTGTGATTCTTGCTGGTGGGCACACGATAGGTACAGCTGCTTGCCAATCTTTCTCAGACAGATTATACAGTCCGAACGGCACTGATCCTTCGATTGACCCTTCATTTGTTCCATTTCTGCGTCAAATTTGTCCACAAAACCAACCAACGAAGAGAGTGGCACTAGACACAGGTAGCCAATTCAGATTTGACACATCTTACTTTGCTAACCTAAAGAGAAGGCATGGAATTCTCCGTTCTGATCAAGTGCTTTGGACTGATGCTTCCACAAGACCCTTTGTTATCAAATACTTGGCCACAGGTCTCTTCAACCAAGAGTTTGCCAAGTCTATGATCAAGATGGGTAACATTGGTGTCAAAACGGATGCTGATGGTGAAATTCGCACCAAATGTTCTGCTGTTAATTAG 963 0.4569 MEGGLWNKELLILKFVLLAVAVVKTVHGKGTYVGFYSGTCPRAESIVRSTVESYVRSDPTLAAGILRMHFHDCFVRGCDGSVLIAGSDTERSAGPNRNLRGYEVIDAAKAKLEAVCPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSIGTEAFTLPGPNDTVAVQNKKFSDKGLNTQDLVILAGGHTIGTAACQSFSDRLYSPNGTDPSIDPSFVPFLRQICPQNQPTKRVALDTGSQFRFDTSYFANLKRRHGILRSDQVLWTDASTRPFVIKYLATGLFNQEFAKSMIKMGNIGVKTDADGEIRTKCSAVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02689 320 SUPERFAMILY Heme-dependent peroxidases 32 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 Pfam Peroxidase 47 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PANTHER PEROXIDASE 25-RELATED 10 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cca08g02689 320 ProSiteProfiles Plant heme peroxidase family profile. 30 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 CDD secretory_peroxidase 33 319 IPR033905 GO:0004601|GO:0042744
Cca08g02689 320 PANTHER PEROXIDASE 10 318 - -
Cca08g02689 320 Gene3D - 34 320 - -
Cca08g02689 320 Gene3D Peroxidase, domain 2 163 299 - -
Cca08g02689 320 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cca08g02689 320 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca08g02689 320 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02689 Cca-Chr8 61311085 61313140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02689 4 320 Peroxidase AT5G64120 59.091 4.83e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02689 K00430 - gmx:100789249 514.227