Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02681 ATGGCCGACCAGATCCACGGTGGAGCATCCATGGAGTCCACCGAATCGCGCTGGGTCATCCAGGACGACGACGACACCTCCGATTTAGAGAACTTCGGCGCTGATTTGAGACTGGGACGCCACGCCACTGTTGTTGATTCCGAGGAGGAGGAGGAAGATAATGCGGAGCAGAGACTCATTCGCACTGGTCCTCGCATCGATTCTTTCGACGTCGAGGCTCTTGATGTCCCCGGTGCTCATACAACTGACTATGAGGATATCAATGTGGGTAAGAAAATTGTATTGGCTTTTCAGACACTTGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATATACCTTCAGTGTTATGTTTAGAAAAGCTCCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTCTTGTACACTTTAATCTTGATTCCTTTAGTGAAGTATGTTTTGGTGGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCGTTGTACTCCTTGATCTGTCGTCATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCCATCTGATGCCCGTATATCAAGCTTTAGGCTGAAGGTGCCATCTCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGAATTCTCTAACTCTGAAGAAGACTCTACTAATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAATGGTGTTGTTACACCAGCAATGTCAGTACTGTCATCTGTTGGTGGTTTAAAAGTTGGGGTAGATGCAATCAAGAAAGATGAAGTGGTGATGATTTCAGTTGCCTGCCTTATCATTTTGTTCAGTGTACAAAAGTATGGAACAAGTAAAATGGGACTTGCAGTAGGACCTGCTTTGTTCTTATGGTTTTGTTCACTTGCGGGCATCGGGATATACAATCTTGTCAAATATGACAGTAGTGTCTTGAGGGCATTTAATCCGATTCACATCTACTATTTCTTCAAGAGGAACTCAACTAAAGCATGGTATTCTCTTGGGGGTTGTCTTCTGAGTGCAACTGGTTCAGAGGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACGATCAGTTCAGCTTTCATTTGTCTTTCTTGTTTTGCCGTGCCTACTACTGGGTTATTTGGGTCAAGCCGCATACCTTATGGAAAACCATGCTGACGCTGGTCAAGTCTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAACATTGCTGCACTTATTGCAAGTCGGGCTATGACAACAGCGACATTTTCATGTATAAAGCAGTCAACtgcacttggttgtttccctcgtctaaaaatcattcatacctctaggaagtttatgggccagatctatatccctgtcataaactggTTCCTCTTggctctttctctggtgcttgtctgcagtatatctagcattgatgagattggaaatgccTATGGCATTGCAGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAGATACACATCATCATAGTGCTGAGTTTCCTGGTAGTCTTCCTGGGATTGGAATTGACTTTTTTCTCATCTGTCCTGTGGAGTGTGACAGATGGAAGTTGGATTATATTGGTCTTTGCCATAATATTGTTTCTTATAATGTATGTATGGAATTATGGAAGCAATCTAAAGTACGAAACTGAAGTCAAGCAAAAGTTGTCAATGGATTTGATGCGAGAATTAGGTTGTAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTTTATAATGAGTTGGTTAAAGGAATACCGGCAATTTTTGGCCATTTTTTGACCACACTTCCTGCAATACACTCCATGATCATATTTGTGAGTATCAAATATGTTCCAGTTCCTATGGTGCCGCAAAGTGAAAGGTTCCTTTTTCGTCGAGTCTGCCCAAAAAGCTATCATATATTTCGTTGTATTGCCAGGTATGGTTACAAGGATGTTCGGAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAGAGCCTGGAGAAGTTTATACGCCGTGAGGCTCAGGAGAGATCATTGGAGAGTAATGGGGATGATGATACTGATTCGGAGAATGAGTACCCTAGTTCTAGGGTTCTCATAGCTCCCAATGGAAGTGTGTACTCACTTGGTGTTCCTCTTCTCGCTGATATTAAGGATACAAGCAACGCCATTTTAGAAGCAAGCACATCAGAGGTTTCAAGCCCAGTATCCCCTGATTCCCCGGTGTTTGATGCTGAGCAGAGCCTTGAGAACGAGTTGTCTTTTATTCACAAGGCTAAAGAATCAGGAGTTGTTTATCTTCTGGGTCATGGGGATATCAGGGCAAGGAAGGACTCGTGGTTTTTCAAGAAGTTAGTTATAAACTATTTTTATGCCTTTTTGAGAAAGAACTGCAGAAGGGGAATCACGACTTTAAGTGTACCACACTCGCATCTGATGCAAGTTAGTATGACTTACATGGTTTGA 2526 0.4006 MADQIHGGASMESTESRWVIQDDDDTSDLENFGADLRLGRHATVVDSEEEEEDNAEQRLIRTGPRIDSFDVEALDVPGAHTTDYEDINVGKKIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLENSLTLKKTLLILVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIKKDEVVMISVACLIILFSVQKYGTSKMGLAVGPALFLWFCSLAGIGIYNLVKYDSSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLSATGSEAMFADLCYFSVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHADAGQVFFSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLALSLVLVCSISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIIVLSFLVVFLGLELTFFSSVLWSVTDGSWIILVFAIILFLIMYVWNYGSNLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESNGDDDTDSENEYPSSRVLIAPNGSVYSLGVPLLADIKDTSNAILEASTSEVSSPVSPDSPVFDAEQSLENELSFIHKAKESGVVYLLGHGDIRARKDSWFFKKLVINYFYAFLRKNCRRGITTLSVPHSHLMQVSMTYMV 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02681 841 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca08g02681 841 PANTHER POTASSIUM TRANSPORTER 19 840 - -
Cca08g02681 841 MobiDBLite consensus disorder prediction 1 26 - -
Cca08g02681 841 TIGRFAM kup: potassium uptake protein 95 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca08g02681 841 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02681 Cca-Chr8 61243703 61249402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02681 9 841 Inorganic Solute Cotransporters AT5G09400 79.548 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02681 - - gmx:100788008 1500.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01469 09 38005774 38014144 Cca08g02681 08 61243703 61249402 PCT