Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02673 ATGAACAAGTTCATCATCATGTGCTTCCTACAGTTGTTGCTGCTTCTATTGTTTCTTTCTGGCAATGCACGCAGTGGCAACATCGTCAAAACCTTACCTGGCTTTCAGGGTCCGTTGCCATTCAAGCTCGAGACTGGATATGTAAGTGTGGAGGAATCGGAGCTGTTCTACTATTTTGTTGAGTCAACAGGAAAGCCACGCATTGATCCTCTTCTCCTTTACTTGGTTGGAGGTCCTGGATGCTCTGGTTTAAATGCACTATTCTACCAAGTTGGTCCTCTGGCTTTCAATGGGACAGAGTATTCTGGGGGTATACCACAAATAATCTTGAAGTCACACGCCTGGACAAAGACAGCAAGCATAATATTTCCTGACGTTCCTGTTGGCACTGGCTTCTCGTATGCTACAACCCCACAAGGTTACCTTATGTCAGATACTATATCAGCTAGACAGACTTACAAATTCTTAAGGAAGTGGCTGATTGAACACCCAGAGTATATCTCGAATAGGATCTATATTGCCACGGATTCATACAGTGGAATATTTGCGCCAATCATTTCACAGTATATATTAGATGGTAATGGCTCCCCCCATATTAATACATCATTAGAGGGAAATTCAAAAGTACCCTATGCCCACAACATGGCACTCATATCAGACAAGCTTTACGAGGCAGCCAAAGAAAATTGCAATGGTTGGTACTATGAAGTAGACCCCTCAAATGCAAAATGTGTGGAAGCACTTCTACCAATATCTCAGTGCGTTGGTGATATTTATGAAGACAATGTTCTGGAATCTAATTGTGCTCTAATATCACCAAAACCAGATGATGAATCGGCTCAAAGAGCTCTCAAAGAAGCCAGGCGTTTCCCCCATCCATCTCCAAAACATAAATTTAAGGACTGGTGGTGCAAGAACTTTGTTTATATACTTTCGGACATATGGGCAAACAATAAGACCGTTCAGGAAGCCCTATATGTTCGCGAGGTATTCGTCAAATACGCATACAATTACGACATTCGAAATGTAATTCCTTATCAGAAGAATCTTACCAACTCAGGTTTACAAATATTAGTTTACGGTGGCGACCTTGACATGGTTATTCCTCACATATCAACTGAAAAATGGTTGAGAAACCTGAATCTTACCATTGATACTTCTTGGACGCCATGGTTTGTCGATGGTCAAGTTGCAGGGTATAAAGTTATATATTCTAATACAGGATACCGGTTGACCTATGCAACTTTGAAGGGAGCAGGTCACTCTCCCACAGAGTACTTCCATGAACGATGCTTTGAGATGTTTCAAAGGTGGATCCATTTTTATCCTTTATAG 1335 0.4142 MNKFIIMCFLQLLLLLLFLSGNARSGNIVKTLPGFQGPLPFKLETGYVSVEESELFYYFVESTGKPRIDPLLLYLVGGPGCSGLNALFYQVGPLAFNGTEYSGGIPQIILKSHAWTKTASIIFPDVPVGTGFSYATTPQGYLMSDTISARQTYKFLRKWLIEHPEYISNRIYIATDSYSGIFAPIISQYILDGNGSPHINTSLEGNSKVPYAHNMALISDKLYEAAKENCNGWYYEVDPSNAKCVEALLPISQCVGDIYEDNVLESNCALISPKPDDESAQRALKEARRFPHPSPKHKFKDWWCKNFVYILSDIWANNKTVQEALYVREVFVKYAYNYDIRNVIPYQKNLTNSGLQILVYGGDLDMVIPHISTEKWLRNLNLTIDTSWTPWFVDGQVAGYKVIYSNTGYRLTYATLKGAGHSPTEYFHERCFEMFQRWIHFYPL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02673 444 Pfam Serine carboxypeptidase 33 440 IPR001563 GO:0004185|GO:0006508
Cca08g02673 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 442 IPR001563 GO:0004185|GO:0006508
Cca08g02673 444 PANTHER SERINE CARBOXYPEPTIDASE-LIKE PROTEIN 11 442 - -
Cca08g02673 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Cca08g02673 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Cca08g02673 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Cca08g02673 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Cca08g02673 444 Gene3D alpha/beta hydrolase 22 274 IPR029058 -
Cca08g02673 444 SUPERFAMILY alpha/beta-Hydrolases 29 440 IPR029058 -
Cca08g02673 444 Gene3D - 307 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02673 Cca-Chr8 61153505 61158840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02673 22 52 Calmodulin-binding Proteins AT2G22960 64.516 3.41e-07 48.5