Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02661 ATGGAGAGCCTCTGCCTCGCACTCCATTGCTCTCTCTCAGCCTCAACCGCAACCTCCTTCTCTCGCTTCTCCCAACTCCACCACCGCCCGAGATCCCAATTCATCCACACCCCATCTCTCCGATCACCCACCGTCAGCTCCTTCCCCTCCAACCCCTCCCCCTTCAGATTCCACCCCCATGACCCAATTCAAGCCTCCAAATCCACGCCGCCACCACCGCCACTCCAGGGCGCGAAGCCAATCCCTCTGGTGATCTCACTATGCATAGGCCTCATCGTCCGCTTCGTGGTCCCCAAACCCCTCGAAGTCACCCCCGAGGCCTGGCAGCTTCTGTCCATTTTCCTGTCCACCATCGCGGGCCTCGTTCTGAGCCCGCTTCCCGTTGGGGCCTGGGCCTTCCTGGGCCTGACGGCCTCTGTTGTGACGAAAACTCTGTCTTTCTCGGCGGCCTTCAGCGCCTTCACGAACGAGGTGATTTGGTTGATCGTCATTTCCTTCTTCTTTGCTCGAGGCTTTGTGAAGACGGGCCTTGGCGATAGGATTGCCACTTACTTCGTCAAGTGGATGGGAAAGAGCACTCTGGGCCTCTCTTATGGGCTCACCTTCAGCGAAGTGCTGATTGCACCCGCCATGCCCAGCACCACTGCCAGGGCCGGTGGGGTGTTCTTGCCCATTATCAAGTCTCTCTCGCTCTCTGCTGGCAGTCAACCCTCCAGTCCTACCTCTAAGAGGCTTGGGGCTTTCCTCATTCAGAACCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAATCTGCTCTGTGTCAAATTAGCAGAGGAGCTTGGGGTCGTAGTGTCAAACCCTTGGGTTACTTGGTTCAAAGCAGCTAGTTTACCTGCGCTTGTTTGTCTTCTTCTTACACCATTGATTTTATACAAGCTCTATCCCCCTGAAATCAAAGACACGCCCGAGGCTCCTGCCCTCGCTGCCAAGAAACTCGAGAGTATGGGCCCTATCACTCAAAATGAATGGATTATGGTTGGTACAATGCTTCTAGCAGTGTCTTTGTGGATCTTTGGAGACACTATTGGCATAGCAAGTGCTGTAGCTGCAATGATTGGTTTATCAATACTCCTCGTATTAGGAGTCCTCGACTGGGATGACTGTTTGAATGAAAAAGCGGCATGGGATACCTTAGCTTGGTTTGCCATTCTGGTAGGTATGGCAAGCCAGTTGACAAACCTTGGTATTGTGAACTGGATGTCTGATTGTGTGGCCCACAACCTCCGATCATTCTCTTTGAGCTGGCCGGCCTCACTAGCTGTTCTTCAAGGAGCTTATTTCTTCATCCACTACCTTTTTGCAAGTCAGACTGGTCATGTGGGGGCCTTATACTCTGCATTTCTTGCCATGCATAGGGCAGCCGGTGTTCCTGGTATTCTGGCAGCGCTTGCTTTAGGTTATAATACAAATCTTTTTGGTGCAATAACACACTATAGTAGCGGCCAGGCTGCTGTATACTATGGAGCTGGTTATGTAGACCTACCGGATATCTTCAAATTTGGGTTCATCATGGCTGTTGTTAATGCTATCATCTGGGGAGGTGTCGGCTCTGTCTGGTGGAAATTTTTGGGGTTGTATTGA 1644 0.5176 MESLCLALHCSLSASTATSFSRFSQLHHRPRSQFIHTPSLRSPTVSSFPSNPSPFRFHPHDPIQASKSTPPPPPLQGAKPIPLVISLCIGLIVRFVVPKPLEVTPEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTASVVTKTLSFSAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSQPSSPTSKRLGAFLIQNQFQSAGNSSALFLTAAAQNLLCVKLAEELGVVVSNPWVTWFKAASLPALVCLLLTPLILYKLYPPEIKDTPEAPALAAKKLESMGPITQNEWIMVGTMLLAVSLWIFGDTIGIASAVAAMIGLSILLVLGVLDWDDCLNEKAAWDTLAWFAILVGMASQLTNLGIVNWMSDCVAHNLRSFSLSWPASLAVLQGAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGILAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKFGFIMAVVNAIIWGGVGSVWWKFLGLY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02661 547 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 9 547 IPR030676 -
Cca08g02661 547 Pfam Sodium:sulfate symporter transmembrane region 82 546 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cca08g02661 547 PANTHER DICARBOXYLIC ACID TRANSPORTER2 9 547 - -
Cca08g02661 547 PIRSF DASS 65 547 IPR030676 -
Cca08g02661 547 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 99 541 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02661 Cca-Chr8 61046102 61049245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02661 1 547 Antiporters AT5G64290 74.735 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02661 - - gmx:100776794 915.99