Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02650 aTGGGAGTGGAGAAGCAGTTGGTAAGGCCTGGAACTGGTCCCAAGCCAGTTCCCGGTCAGAACGTCACCGTTCACTGCACCGGTTTCGCAGGGAAGAACGGTGACCTTTCTCAGAAATTTTGGAGCACAAAGGATCCTGGCCAGAGCCCTTTTACATTCAAAATCGGCCAAGGTTCTGTTATCAAAGGTAATACCATTTTTACTTTGTTCCTGTTCCTGTTGCTTTTGCATGCCTGCAATCTAAATTCACATTTCTCTCTAGGATGGGATGAAGGTGTGATTGGCATGCAAGTCGGTGAAGTTGCTCGTCTCCGGTGCTCCCCTGATTATGCTTATGGTACTGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTGTTTTGGAATTTGAAATCGAAGTCTTGAATGCGCAATGA 417 0.4748 MGVEKQLVRPGTGPKPVPGQNVTVHCTGFAGKNGDLSQKFWSTKDPGQSPFTFKIGQGSVIKGNTIFTLFLFLLLLHACNLNSHFSLGWDEGVIGMQVGEVARLRCSPDYAYGTGGFPAWGIQPNSVLEFEIEVLNAQ 138
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02650 138 SUPERFAMILY FKBP-like 85 136 - -
Cca08g02650 138 SUPERFAMILY FKBP-like 2 63 - -
Cca08g02650 138 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 138 IPR001179 GO:0003755
Cca08g02650 138 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 88 136 - -
Cca08g02650 138 PANTHER PEPTIDYLPROLYL ISOMERASE 1 64 - -
Cca08g02650 138 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 64 - -
Cca08g02650 138 PANTHER PEPTIDYLPROLYL ISOMERASE 88 136 - -
Cca08g02650 138 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 135 IPR001179 GO:0003755
Cca08g02650 138 Gene3D - 1 138 IPR046357 GO:0003755
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca08g02650 Cca-Chr8 60974315 60975476 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02650 2 135 Calmodulin-binding Proteins AT5G48570 33.333 1.09e-11 59.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02650 K01802 - gmx:100305505 210.69