Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02626 ATGGCTCCATCGTGTTATGCTATGGGAATCATTTTCTTACTTCCTTTGATTACTTTTGTAAACCCACTTTCATTTCACTACCAAGGGTTTGAGTATGATGATACCAAGATTGAAGGTGATGCCACTTTGTCACATTCACAAATCCAACTCACTGCAACCACAAGGTACCAAAGCAATGCTTACAGTGTTGGGAGAGTCACAAGTTTTGAGTCATTGCACCTTTGGGACATGAGCTCAGGAAACCTCACTGACTTCACTACCAAATTTTCCTTTGTCATTTTCTCAAATGATACTAGTTTTGGGGATGGCTTGGCTTTTTTCTTTGCAGATCCAAAGCTGCCACTTTCAAGAAAGATACAAGAAGGAGGTGGTCTTGGTCTTGTGGATGGAAACCAATTATTGAACTCAACTAAGTATCCATTTGTGGCTGTGGAGTTTGATACACACCAAAATTCTTGGGATCCACCTGACTTTCATGTAGGTATAAATTACAACTCTATGAGATCTCACATAACTGTTCCATGGCCGATTGATATTAGACAAATGAAAGTTTATCATTGTGTAATTGAGTACAATGCAAGTACTCATAATTTAATCGTTTCTTTCACTGGAAACGAAATCAATGGCAAGCAAATAAAAAGTTATATCTCTTGCAATGTTGATTTGAGAGATTACCTACCAGAGTGGGTTATTTTCGGCTTCTCAGCTGCTACAGGATATTTGTTTGAGATGAACACACTGCAGTCATGGTCATTCCATTCAACTTTACAAAGTAACAAGAATGTGTCAAATCAGATACCTCCAATTGCAACCTCCCCAATCCAAAGTCCTAGTCCTTCACCAATTGCCACTGCTACTATTAGCCCTAAACAAGAGGGCAACAAAGGTTTATTGATGAGGCTAGAAGTTGGTATAGGTGTAGCTGCAAGTTTGCTTCTTTTAGGGTTGGTTTGTATTTTAATGTGGAAGAGGGCTAAAGGGAAAAAAGAAGATTCCCTTGTAGATCTGAGCATGGATGATGAATTCCAAAAGGGCATTGGTCCCAAGAGATTTTGCTATAGACAATTGGCAAGTGCAACAAGTAACTTTGCAGAAGCACAAAAGATAGGACAAGGTGGTTTCGGTGGTGTTTATAAAGGCTATTTGAAAGACTTAAAATCCAATGTTGCTATAAAGAGAATATCAAGAGAATCTAAGCAAGGAATTAAGGAATATGCCACGGAAGTTAAGATCATCAGCCAGCTGAGGCACAGGAATTTAGTACAACTAATTGGTTGGTGCCACATGAAGAAAGATCTCCTCCTTATATACGAGTTCATGCAAAATGGTAGCTTAGATTCCCACCTATACCGTGGGAAAAGCATCTTGACATGGCAGATGAGGTACAACATTGCAATGGACTTGGCTTTGGCAGTGTTGTACCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATAAAATCCAGCAATGTTATGTTGGACTCAAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGTTGGTTGATCATGAGAAAGGAACACAAACCACAATGCTAGCAGGGACCATGGGGTACATAGCCCCAGAATATTTCACTACAGGGAAGGCTAGAAAGGAATCTGATATGTACAGTTTTGGAGTTGTTTTGTTGGAGTTAGCAAGTGGAAGAAAACCAATTGATCTTAATGCCAATGAAGGTCAAATAACCATATTTGAGTGGGTTTGGGAGTTCTATAGATTGGGAAAGTTACTTGAAGTGGCAGACTCAAAACTTGGGGGAGCATTTGATGAGGAACAAATGGAACATTTAGTGATTGTTGGACTTTGGTGTGCCAATCCAGACTATACATCAAGGCCATCTGTGAGGCAAGTGATTCAAGTGCTTAAGTTTGAAGCTCCTTTACCAATTCTCCCACAGAAAATGCCTGAACCAAATTACCATTCTCCATCAATGAGTACAATTTTTGCTTCAGTTTCATCTCCCTCTCTGGCTACATGCTAG 2013 0.3989 MAPSCYAMGIIFLLPLITFVNPLSFHYQGFEYDDTKIEGDATLSHSQIQLTATTRYQSNAYSVGRVTSFESLHLWDMSSGNLTDFTTKFSFVIFSNDTSFGDGLAFFFADPKLPLSRKIQEGGGLGLVDGNQLLNSTKYPFVAVEFDTHQNSWDPPDFHVGINYNSMRSHITVPWPIDIRQMKVYHCVIEYNASTHNLIVSFTGNEINGKQIKSYISCNVDLRDYLPEWVIFGFSAATGYLFEMNTLQSWSFHSTLQSNKNVSNQIPPIATSPIQSPSPSPIATATISPKQEGNKGLLMRLEVGIGVAASLLLLGLVCILMWKRAKGKKEDSLVDLSMDDEFQKGIGPKRFCYRQLASATSNFAEAQKIGQGGFGGVYKGYLKDLKSNVAIKRISRESKQGIKEYATEVKIISQLRHRNLVQLIGWCHMKKDLLLIYEFMQNGSLDSHLYRGKSILTWQMRYNIAMDLALAVLYLHEEWEQCVLHRDIKSSNVMLDSSFNAKLGDFGLARLVDHEKGTQTTMLAGTMGYIAPEYFTTGKARKESDMYSFGVVLLELASGRKPIDLNANEGQITIFEWVWEFYRLGKLLEVADSKLGGAFDEEQMEHLVIVGLWCANPDYTSRPSVRQVIQVLKFEAPLPILPQKMPEPNYHSPSMSTIFASVSSPSLATC 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02626 670 Pfam Legume lectin domain 23 262 IPR001220 GO:0030246
Cca08g02626 670 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Cca08g02626 670 Gene3D Phosphorylase Kinase; domain 1 348 439 - -
Cca08g02626 670 CDD lectin_legume_LecRK_Arcelin_ConA 23 256 IPR001220 GO:0030246
Cca08g02626 670 Gene3D Transferase(Phosphotransferase) domain 1 440 653 - -
Cca08g02626 670 Pfam Protein kinase domain 364 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02626 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 258 IPR013320 -
Cca08g02626 670 ProSiteProfiles Protein kinase domain profile. 363 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02626 670 SUPERFAMILY Protein kinase-like (PK-like) 347 655 IPR011009 -
Cca08g02626 670 PANTHER - 11 668 - -
Cca08g02626 670 PANTHER LECTIN RECEPTOR KINASE 11 668 - -
Cca08g02626 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Cca08g02626 670 CDD STKc_IRAK 369 633 - -
Cca08g02626 670 ProSitePatterns Protein kinases ATP-binding region signature. 369 392 IPR017441 GO:0005524
Cca08g02626 670 ProSitePatterns Legume lectins alpha-chain signature. 226 235 IPR000985 -
Cca08g02626 670 Gene3D - 21 268 - -
Cca08g02626 670 SMART serkin_6 363 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02626 Cca-Chr8 60699697 60701709 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02626 1 651 Receptor kinase-like Gene Family AT5G10530 44.729 2.11e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Cca08g02626 Pkinase 5.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02626 - - gmx:100814713 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01406 09 37351223 37353578 Cca08g02626 08 60699697 60701709 PCT
Cca08g02626 08 60699697 60701709 Cca09g01402 09 37329311 37331302 PCT