Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02622 ATGAGTTCCCAAGGTGTCGCTGAAGATTGCGTAGGATGGGCTGCAAGAGATGAATCCGGAGTTCTATCACCTCACAAATTCAGCCGCAGGGCTCTTGGAAATGAAGATCTTCATATTAAAATTACACACTGTGGTGTTTGTTATGCTGATGTAGTTTGGACAAGGAATTTACATCGCGACTCAATGTACCCCGTTGTGCCTGGTCATGAGATTGCTGGGATTGTCACAAAGGTTGGCTCCAATGTCCACAGTTTCAATGTTGGTGACCATGTTGGAGTGGGGACTTATGTTAGCTCATGTAGGGATTGTGAGTATTGTAATGACAGGCTAGAAGTTCATTGTACCAAAGGATCAGTTTACACTTTTAACGGTGTTGATTTTGATGGTACAATTACAAAAGGAGGATACTCGAGTTACATAGTAGTCCATGAGAGGTATTGCTTCATGATCCCAAAAAGCTATCCATTGGCTTCAGCAGCTCCTTTGCTTTGTGCCGGAATTACTGTTTATTCACCGATGGTGCGCCACAAGATGAATCAACCTGGTAAATCTCTAGGAGTGATTGGTCTTGGTGGCCTCGGTCATATGGCAGTGAAATTTGGAAAGGCATTTGGTTTGAGTGTAACAGTTTTCAGCACTAGCATATCCAAGGAAGAGGAGGCACTGAGCCTGCTTGGTGCAGACAAATTTGTTGTTTCATCTAACCAAGAAGAAATGACGGCGTTGGCTAAATCATTGGACTTTATAATTGACACAGCATCTGGTGATCACCCGTTTGATCCTTATTTGTCACTTTTGAAGACATATGGTGTTTTTGTCCTAGTTGGTGTCCCTAGTGAAGTCAAATTCAGCCCTGTAAGTCTTGTTATAGGATCGAAGACTGTTGCGGGAAGCATTACAGGTGGTACAAAAGATATACAAGAGATGATTGACTTCTGTGCTGCCAATGGAATTTACCCAAATATAGAGCTCATTCCAATAGAGTACGCCAATGAAGCTCTCGAGAGGCTCATAAATAAGGATGTCAAATATCGGTTTGTAATAGACATTGAGAACTCCCTAAAATAA 1068 0.4213 MSSQGVAEDCVGWAARDESGVLSPHKFSRRALGNEDLHIKITHCGVCYADVVWTRNLHRDSMYPVVPGHEIAGIVTKVGSNVHSFNVGDHVGVGTYVSSCRDCEYCNDRLEVHCTKGSVYTFNGVDFDGTITKGGYSSYIVVHERYCFMIPKSYPLASAAPLLCAGITVYSPMVRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKEEEALSLLGADKFVVSSNQEEMTALAKSLDFIIDTASGDHPFDPYLSLLKTYGVFVLVGVPSEVKFSPVSLVIGSKTVAGSITGGTKDIQEMIDFCAANGIYPNIELIPIEYANEALERLINKDVKYRFVIDIENSLK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02622 355 PANTHER - 2 354 - -
Cca08g02622 355 CDD CAD1 11 349 - -
Cca08g02622 355 PANTHER ALDEHYDE REDUCTASE 2 354 - -
Cca08g02622 355 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Cca08g02622 355 SUPERFAMILY GroES-like 17 183 IPR011032 -
Cca08g02622 355 Pfam Zinc-binding dehydrogenase 192 314 IPR013149 -
Cca08g02622 355 Gene3D - 165 320 - -
Cca08g02622 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Cca08g02622 355 SMART PKS_ER_names_mod 15 348 IPR020843 GO:0016491
Cca08g02622 355 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Cca08g02622 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cca08g02622 355 Gene3D - 13 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02622 Cca-Chr8 60651990 60659064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02622 2 355 Monolignol Biosynthesis Gene Families AT1G72680 72.034 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02622 K00083 - gmx:100806165 662.914