Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02582 ATGGCTTCCCGCAATCAGAACAGGCCTCCTCGCAGTCCCTCCAGTAAAAAGGGTGGCGCCGACGATGTTTTCTCAGACAAGCGTCGAAGGATTGGCGGCACAGAGAGGATGGAGCGACAGGGCAGAGGCAGAGCACCCCTCGGCGCTCTCGTCGCCAAGACAGATGCTAACAATGATGGTGGCAGCGCCGACGGCGCCGCCGAGTGCAGCGCTGTTGAGTTCACCAAAGAGGAAGCAGAGGCGCTGCTCAATTGGAAGCCCAAGAAGGGTAACCCCTTTGATCACAAGAAAAAACTGGAGCAGATAGCAGATCACAATAAACGGCTTAGACTGTGTGTTCGATGGTACATGGGAGTCGAAGAAGGCTACATCCAAGAGAAAGAGAAGCTTCAGACCGACCTAGAATCTGCTGTGAACAAGTGCACTGATACTGAGAATGCGATGAAGATTAAGATTGCAGAGTCGGATGAGACTATATCTAATTTGAGGGTGAATATTTCCTCTTTAGAAGAGAGAGTTGCAAAGGAAGAGTCGGATAAATTGGAAGCTATTGCTTCTTATAGAAAAGAAAAGGAAGCCAGAAGTGCAGCTGAGCAGATGCAAGCTTCTATTTCAACCGAGCTTCAGAAAGTTCGGGAAGAGAAATCAGCTGCTGAGCAGAAGGCCATTTCAAATGAGGACTTGTACAAGCGATCACAAGAGTATAACTTGAGTCTGCAACAGTACAACAGTCGCCTTCAGTCAGATCTTGACACAACTAATAAGGAACGTAAACAACTGGAGATGGAGAAAGCAACCATTGTTGAGAACCTTAGCAATGTGAGGGTCCACAACAAGGCATTGCAGGATCAGTTGACATCTGTTAAAGCTTCACAAGATGAGTCTGCAAAGCAGAAAGAATTGTTAGGAAATGAAAACATATGCCTTCGGGAAGAATTAAAACAAATTAAAGGTGATCGAGATCGCCAACAGGTACAGGTACTAGCTCTGACTGGAGAAGTAGAAAAATACAAAGAACATACAGGGAAAACTTGTGCACAGTTGGATACCTTGAAAATTAGAACAAATGCTCTCGAGGAGACATGTTCTTCTCAAAGGGACCAAATAAATATGCTGCAACAGCAGTTGATTACTGAAAGAGAGAAGTTGAAGACGGCTAATTTGTCTGCTTCAGAAATAAGAACCGTGTTTGAAGATCAGAAAAGAATTATACGTGAACTACAGGAACGAATTGCAGAGAAAGAATTCCAAGTAATCGAAGGAGAAAAGTTAAGGAAAAAATTGCATAACACTATTCTGGAGCTAAAAGGAAATATTCGTGTGTTCTGTCGTGTCCGACCAATGCTTTCGGATGAAAGTTCTGGAACAGACATGGTTGTTTCTTATCCCACGTCAACAGAAGCTCTTGGCCGGGGCATTGATTTGATACAGAGCGGGCAGACGTATCCTTTTACATTTGACAAGGTATTTAATCATGAGGCTTCTCAGCAAGATGTTTTCATTGAGATATCACAGTTGGTGCAAAGTGCTCTTGATGGGTACAAGGTCTGTATCTTTGCTTATGGACAGACAGGTTCAGGGAAAACCTATACAATGATGGGTAGGCCTGACGCCCCCGAGCTGAAGGGGTTGATACCACGATCTCTTGAACAGATATTCCAGATTAGTCAGTCCCTGAAAGATCAGGGGTGGAAGTACAAAATGCAGGCTTCAATATTGGAAATATATAATGACAGCATCAGGGATTTGTTGTCATCAAATCGGTCAAGTGGTATTGACTCAGCACGAACAGAAAATGGCGTTCCTGCTTCTGGAAAGCAGCCGTACACTATTAAACTCGATGTCAATGGAAACCCATATGTTCCTGACCTCACTATCGTGGATGTTTGTAGTGCAAATGAGATTTCATCCCTTCTGCAACGGGCAGCACAGAGCAGGTCTGTAGGAAGTACCCAGATGAATGAACACTCATCACGGAGTCACTTTGTGTTTACTTTGCGTATATGTGGGATTAATGAGAGAACTGAACAAGAAGTGCAAGGTGTGTTAAACCTGATTGATCTTGCTGGAAGTGAAAGACTGTCGAGAAGTGGGGCAACCGGGGACCGGTTGAAGGAAGCTCAGTATATCAACAAAAGTCTCTCCTGTTTGAGTGATGTAATATTTGCTTTGGCTAAGAAAGAGGAGCATGTACCTTTCAGGAATTCAAAATTGACACACCTTCTACAGCCATGTCTTGGTGGAGATTCGAAAACTTTGATGTTTGTGAACATATCACCTGACCCATCTTCAACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCCGCTAGGGTCAATGCTTGCGAGATTGGTATTCCGCGGCGTCAGACATCCACGCGATCCATTGATTCTCGTTTAATCTGCGGCTAA 2409 0.4438 MASRNQNRPPRSPSSKKGGADDVFSDKRRRIGGTERMERQGRGRAPLGALVAKTDANNDGGSADGAAECSAVEFTKEEAEALLNWKPKKGNPFDHKKKLEQIADHNKRLRLCVRWYMGVEEGYIQEKEKLQTDLESAVNKCTDTENAMKIKIAESDETISNLRVNISSLEERVAKEESDKLEAIASYRKEKEARSAAEQMQASISTELQKVREEKSAAEQKAISNEDLYKRSQEYNLSLQQYNSRLQSDLDTTNKERKQLEMEKATIVENLSNVRVHNKALQDQLTSVKASQDESAKQKELLGNENICLREELKQIKGDRDRQQVQVLALTGEVEKYKEHTGKTCAQLDTLKIRTNALEETCSSQRDQINMLQQQLITEREKLKTANLSASEIRTVFEDQKRIIRELQERIAEKEFQVIEGEKLRKKLHNTILELKGNIRVFCRVRPMLSDESSGTDMVVSYPTSTEALGRGIDLIQSGQTYPFTFDKVFNHEASQQDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPELKGLIPRSLEQIFQISQSLKDQGWKYKMQASILEIYNDSIRDLLSSNRSSGIDSARTENGVPASGKQPYTIKLDVNGNPYVPDLTIVDVCSANEISSLLQRAAQSRSVGSTQMNEHSSRSHFVFTLRICGINERTEQEVQGVLNLIDLAGSERLSRSGATGDRLKEAQYINKSLSCLSDVIFALAKKEEHVPFRNSKLTHLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNACEIGIPRRQTSTRSIDSRLICG 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02582 802 CDD KISc_C_terminal 436 783 - -
Cca08g02582 802 Coils Coil 355 375 - -
Cca08g02582 802 MobiDBLite consensus disorder prediction 588 607 - -
Cca08g02582 802 SMART kinesin_4 436 789 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 ProSiteProfiles Kinesin motor domain profile. 438 781 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 MobiDBLite consensus disorder prediction 588 604 - -
Cca08g02582 802 Gene3D Kinesin motor domain 380 783 IPR036961 -
Cca08g02582 802 PRINTS Kinesin heavy chain signature 513 534 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 PRINTS Kinesin heavy chain signature 651 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 PRINTS Kinesin heavy chain signature 682 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 PRINTS Kinesin heavy chain signature 731 752 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 ProSitePatterns Kinesin motor domain signature. 681 692 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca08g02582 802 Coils Coil 397 417 - -
Cca08g02582 802 MobiDBLite consensus disorder prediction 20 42 - -
Cca08g02582 802 Coils Coil 243 270 - -
Cca08g02582 802 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 800 - -
Cca08g02582 802 Pfam Kinesin motor domain 444 779 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g02582 802 MobiDBLite consensus disorder prediction 1 64 - -
Cca08g02582 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 779 IPR027417 -
Cca08g02582 802 Coils Coil 152 179 - -
Cca08g02582 802 Coils Coil 201 221 - -
Cca08g02582 802 Coils Coil 120 147 - -
Cca08g02582 802 PANTHER KINESIN-LIKE PROTEIN 3 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02582 Cca-Chr8 60190942 60197585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02582 347 795 Calmodulin-binding Proteins AT5G65930 36.601 2.71e-79 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01367 09 36847125 36852914 Cca08g02582 08 60190942 60197585 PCT