Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02581 ATGGCTCCGAAGCAGAAGCTGCGCCCTTCCCATCTGGAGGACCCTCCCACCGCATCCTCTTCCTCCTCCGGCGAAGAAGACCAACAGCCATCCTCTCAACAGCGCCAAGAGGATGAAGTTCCGTCCGCagaagaggaagaagaagaagCTTCCTCCCAAGAAGATGAAGAGGATGACGACCTCCCACCCCCTCCTCCCACAAACCCCCAATACCAACCCTCATCCtccgaaactgataccgactccggatccgagactgaatccgaacccgaCCCCACTCCTGCCAAGGTAAAGCCCCTCGCCTCCAGGCCCATGGACCAGCCCCAAAAGCCCAAGCCCCAGCCCTCCGCGGCGCCCTCCAAAACCATCGGACTCAAGCGCACTGTCGATAACAACAACATCGCTGACCCCAAACGCCCCAAGAAGAAACCCGCCAATTCTTCTTCTTccaccgccgccaccgccaccgccgccgcctccgacgATGAGATGGAGGAGGACGGGAAGAAGTCCGGCGATCAGGCCAAAAAGTCTCGGCTTTGGAGCGAGGAGGACGAACTCGCGATTCTGAAAGGCATGGTTGATTTCACTTCGAAAACAGGGCAGGACCCTCTCAAGTTCACCAATGCCAGTGCTTTCCACGACTTCATGAAGAAGCTGCTGCACGTGGAGGTCACCAGCAACCAGCTGAAGGAGAAGGTCAGAAGGTTGAAGAAGAAGTTTGAAACCACTGCTGGGAAAGGGAAGAATGGGGAAGCTCCCACCTTTTCCAAACCCCACGACCAGAAAGCGTTTGAGTTGTCGAAAAAGGTTTGGGGAAGTGAACAGGGTTTGGGTGCCGTTGCCATTGCCAATGGGCCCGTGGAAAAGCCCAAGTCCAATGGGAGTGTTGCCAAGAGTCCGAAGAAGAAGGAATCCAGTAGCAGGAACGTGGCTTCTGCCAGGAAACCCAAGCCTGAAGCGAAACCTGAACCTCAGGAGCAGGAGAAAGTGTCCTCGGTGTTGAAGGAGGTTGAAAAGGTGGAGGCTGACCAGAAGCTCCATGGTGGTTGCTCTAGTTCGCTTTGGCGTGAGTTGTGTAACCAGAAAAGGGGTGTTTTGCTGAATGAGGATGCAGTGAAGATGGGATTGGAGCTGATTGGAGAATCGAAGAGGGCAGAGTTGGAAGAGAAGTGGAGGAAATTTCGACTTGCTGAGATGAAACTCTTTGTGGATCGTCAACTACTCATTGCGGAGCACACTAGGTTGATAGTTGAGGCGCTTGAGTCATCTAACAATTAG 1281 0.4941 MAPKQKLRPSHLEDPPTASSSSSGEEDQQPSSQQRQEDEVPSAEEEEEEASSQEDEEDDDLPPPPPTNPQYQPSSSETDTDSGSETESEPDPTPAKVKPLASRPMDQPQKPKPQPSAAPSKTIGLKRTVDNNNIADPKRPKKKPANSSSSTAATATAAASDDEMEEDGKKSGDQAKKSRLWSEEDELAILKGMVDFTSKTGQDPLKFTNASAFHDFMKKLLHVEVTSNQLKEKVRRLKKKFETTAGKGKNGEAPTFSKPHDQKAFELSKKVWGSEQGLGAVAIANGPVEKPKSNGSVAKSPKKKESSSRNVASARKPKPEAKPEPQEQEKVSSVLKEVEKVEADQKLHGGCSSSLWRELCNQKRGVLLNEDAVKMGLELIGESKRAELEEKWRKFRLAEMKLFVDRQLLIAEHTRLIVEALESSNN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02581 426 MobiDBLite consensus disorder prediction 241 262 - -
Cca08g02581 426 Coils Coil 220 240 - -
Cca08g02581 426 Coils Coil 33 53 - -
Cca08g02581 426 MobiDBLite consensus disorder prediction 40 62 - -
Cca08g02581 426 Pfam Protein of unknown function, DUF573 178 273 IPR007592 GO:0006355
Cca08g02581 426 PANTHER BNAANNG10740D PROTEIN-RELATED 13 424 IPR007592 GO:0006355
Cca08g02581 426 MobiDBLite consensus disorder prediction 1 181 - -
Cca08g02581 426 PANTHER STOREKEEPER PROTEIN 13 424 - -
Cca08g02581 426 MobiDBLite consensus disorder prediction 14 37 - -
Cca08g02581 426 MobiDBLite consensus disorder prediction 162 181 - -
Cca08g02581 426 MobiDBLite consensus disorder prediction 283 333 - -
Cca08g02581 426 MobiDBLite consensus disorder prediction 296 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02581 Cca-Chr8 60182441 60184123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02581 75 420 GeBP Transcription Factor Family AT1G61730 30.682 3.75e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Cca08g02581 DUF573 2.6e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02581 - - gmx:100807745 438.728