Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02569 ATGCCAGGTTTTTGCTTCTTCCTCTTTCTGTTGCTGGCATCACACATCACAACCTCACACTCCGCAGACACGTTAACCTCATCGCAAATCCTCGGAACCAACGAAACCCTCGTATCACCAAACCAAGTCTTCGCTCTATGCTTCTTCCCAGGCACCAACTCCACCTGGTACTTGGGCATACGCTACAACAACATCAAGGACTCAACCGTCGTGTGGGTGGCCAACAGAGACAACCCTCTCCAGAACTCCACAGGGTTCCTCAAAATCGGAGACAGCGGAAACATGCTTCTCACGGATTCATCAAAGAAGGCCGTTTGGTCCTCCAACGAAACCAAAGCCAAAAACCCTATGCTTCAGCTCTTGAACACAGGAAACCTAGTTCTGAGAGAAGAAAACATAACCGACCCCACAAAATATGTCTGGCAAAGCTTCGATTACCCAACGGACACGCTCCTACCCGGCATGAAGATGGGGTGGAACCTGGACACGGGCGTGGAGAAACACTTAACATCGTGGACAACCACAGGGAGAGACCCTTCAAGCGGAGATGTTTCTTTCAAGATAGAGACACGTGGAGTACCAGAAATCTTCTTGAGAAAAGACAACAACATAACATACAGAAGCGGACCCTGGAATGGTGAGAGATTCAGCGGGGTGCCAGAGATGGAACCCGACACAGATTCCATAACATTTAATTTTTCGTACGATAAACACGGTGTCTACTATTCTTTCTCCATTGGGAACCCTTCGATTTTGTCGAGGTTGGTAGTGACTTGGGATGGGCAACTTGAGCGTCTGACGTGGGTGCCGAGTAGTGGGACGTGGACCACGTTTTGGTTCGCGCCCAAGGATCAGTGTGATGATTACAGAGCGTGCGGTCCTAACGGCGTGTGCGACTCGAACGCTTCGCCGGTTTGCACGTGCGTGAGGGGGTTCAAGCCGAGGAATGTGGCGGCGTGGAGCTTGAGAGATGGGTCTGATGGGTGTGTGAGGGAGACGGAGTTGGATTGCGGGAGTGATGGGTTTGTGAAGGTTGAGAACGTGAAGTTGCCGGAGACGAGTAATGTGTTTGCGAATAGGAGCATGAGCTTAAGGGAGTGTCAGAGTTTGTGCCGCAGGAATTGTTCTTGCATGGGTTATGCTAACATCGAGGTTAGTGAGGGAGGACGAGGGTGCGTCATGTGGCCCGGTCAACTCTTCGACATTCGAAAGTATCCTGCTGGTGGACAAGATTTGTATGTCAGATTAGCAGCTTCTGATCTAGATGACGTAGGATCTGCAGGTGGCTCTCAGTCTCACAAGACAAGCCATGTAGGTGAGGCTGTAGGAATTACAATTTCTGCAGCAGTAATAATTTTGGGATTGGTTCTCATTTTCTGGAAAAGGAGGAAACTGTTAAGTACATCAAATGTGAAGACAGCCCCCAGAGGTTCTTTCCATAGAAGTCGGGATTTGCTAACGAGTGAAGGGATGTTTTCAACTAATAGAGAAAACTCGGGAGAAAGGAGCATGAATGACATAGAGTTGCCGATGTTTGATTTTAATACCATAACAATGGCCACAAACAACTTCTCCGAAGAAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAGGGGTAGGTTGATGGAAGGCCAAGATATTGCTGTGAAGAGACTATCTAAAAACTCGGGGCAAGGAGTTGATGAATTTAAGAATGAGGTCAAGTTAATTGTCAGGCTTCAACATAGAAATCTTGTTCGGCTCTTTGGTTGCTGCGTTGAGATGGATGAGAAGTTGCTAGTTTATGAGTACATGGAAAATAGAAGTCTTGATTCCATTTTGTTTGACAAAGCCAGAAAACCCACACTGGACTGGAAAAGACGCTTCAACATTATATGTggcatagctagagggctactttatctgcaccatgattccagattcaggattatacatagggatctcaaggcaagcaacattctacttgacagtgaaatgaacccaaagatatcagactttgggatggctagactTTTTGCCTCAAACCAGACAGAAGCAAACACATTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCCATGGATGGGAACTTCTCAGTGAAATCTGATGTTTTTAGTTTTGGAGTTCTAGTGCTGGAAATTATAACGGGAAAGAAAAACAGAGGATTCTATTACGCAAACGATGATATGAATCTTCTAGGGAATGCATGGAGGAAGTGGAGAGATGGCAGTGCATTGGAACTCATTGATTCATCAATTGGCGATTCATATTCACCATCTGAAGTTCTTAGATGCATACACGTTGGGCTCTTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGCCTTCAGTGATGTTGATGCTGAGTAGTGAATCTGCATTAATGCCACAACCAAGAAACCCTGGGTTTTCCATAGGGAAGAATCCTGCGGAAACTGATTCTTCTTCAACTCCACTGTTGTCTCTCAACAATAAAGGTTTGGAAGCAGATGATGCAATAACTCCACCACAAACCATCAGTGGCAACAAGACACTAGTCTCACCTTCCCAAAATTTTGAACTTGGTTTCTTCAGTCCTGTGAATTCCACTTACATCTATCTTGGAATATGGTACAAGCATATCCCAAAACAGACAGTTATTTGGGTTGCAAATAGAGACAAACCACTTGTTAACTCTGGTGGCTCCTTAACATTCAGCAATGATGGTAAGCTCATACTTCTCGGCCACACAGGGAGTGTTATATGGTCCTCAAACTCATCTGCTCCTGCAAGAAACCCTGTGGCACAGCTTCTAGACTCTGGAAACTTTGTGTTGAAGGACTATGGAAATGAAGGATCTTTGTGGGAGAGTTTTGATTATCCTTCTGACACATTGATACCAGGAATGAAGCTTGGTTGGAACTTCAGAACTGGCTTGAGCAGACATTTGACTTCGTGGAAAAGCACTTCTGATCCTTCTTCAGGAGAATACACCTACAGTGTGGATCCACGTGGCCTTCCTCAGCTTTTTCTTCACAAGGGAAACAAGAAGGTCTTCAGAAGTGGACCGTGGTATGGACAACAATTCAAAGGTGACCCGGTTCTCAGCGCAAACCCGGTTTTCAAACCCATATTTGTTTTTGATTCCGATGAAGTTTCTTACTCTTATGAGACCAAAGACACCATTGTTTCAAGATTTGTGCTGAGTCAGTCTGGTTTGATTCAGCATTTTTCATGGAATGATCATTATTCCAGTTGGTTCTCTGAATTCTCGGTTCAAGGGGACCATTGTGATGATTACGGCCTTTGTGGTGCTTATGGCTTTTGTAGCATCAAAAGCTCACCGATTTGCAAGTGTTTGGAGGGTTTTGAGCCTAAGCTTCCACAAGAATGGGAAAGTTTTCAGTGGTCAGGTGGATGTGTTAGGAAGAACGCACATGTTTGCAGCAATGGAGATGCATTCAAGCAGTTTACAGGTATGAAACTACCAGATGCCGATGAGTTTCATACAAACTACAGCATCAGCATCAATCACTGTGAGGCAGAATGTTCCAAGAACTGCTCTTGTGTTGCTTATGCCAAGCTAGACATCAATGCAAGTGGCAAAGGCTGTATTGCATGGTTTGGGAATTTATTTGATGTAAGAGAGGTTTCTGTGAATGGACAAGATTTCTATGTGAGAGTTCCAGCTTCTAAATTAGGTTCAAATGTTGATGGAAACAAAAGGAAGAAACTCATACTGTTTCCTGTGGCTGCATCTGTAACTTCAACAATCATTGTATCAGCATTGTGGTTGATAATTAAGAAATGCAGAAGGAAAATAGCCAAAGAGACAGGTGGTGAGTTTGGTGTTGGCAGAGCAAGGAGTGAAAGGAATGAATTTAAACTCCCATTGTTTGACATTGCCGTAATTGAAGCCGCCACCGGGAATTTCTCAATTTACAATAAGATTGGAGAGGGTGGATTTGGTCCGGTATACAAAGGTCAACTTCCATCAGGACAGGAAatagcagtgaagaggctgtcagagacttctggacaaggcctgcaggagttcaagaatgaggttattttgatctcccaacttcagcatagaaatcttgtcaagcttctgggttgttgcattcatggagaagataaaatgttggtctatgaatacatgccaaacAGAAGCTTGGACTCCTTATTATTTGATGAAAACAAGCGTTCTGTGCTGAGTTGGCAAAAGAGGCTAGACATAATTATTGGCATTGCTCGGGGACTTCTCTACCTTCACAGAGATTCAAGACTGAGaataatccatagagacctaaaagcaagcaatgttcttttagatgatgaaatgaacccaaaaatttctgactttgggatggcaagaATGTTTGGTGGAGATCAAACTGAAGCAAAGACCAAGAGAGTAGTGGGAACCTATGGATATATGCCTCCAGAGTATGCAATAGATGGACACTTCTCTTTCAAATCAGATGTTTACAGCTTTGGGGTTTTACTCTTGGAGCTGTTGAGCAGCAAGAAAAACAAAGGATTTCTTCACCCGGATCACAAACTGAATCTCCTTGGCCATGCTTGGAAGCTATGGAATGAAGATAGGGCCTTAGAGCTGATGGATCCATTGCTTGAGAATGAGTTTCCTACACGTGAAGCTCTAAGATGCATTCAAGTGGGTCTGTCATGCGTGCAACAGCACCCAGAAGATAGGCCAACAATGTCGTCGGTGCTTTTGATGTTGAACAGTGAGAGTGTGTTGGTCCCACAACCTGGAAGGCCAGGATTATATTCCGAGAGATTTTTTTCTGATACTAATTCATCATCTCGTGGTGCTGGACTCAATTCTGGTTCCAATCACATAACTGTTACTTTACAAGAGGGTCGTTGA 4893 0.41 MPGFCFFLFLLLASHITTSHSADTLTSSQILGTNETLVSPNQVFALCFFPGTNSTWYLGIRYNNIKDSTVVWVANRDNPLQNSTGFLKIGDSGNMLLTDSSKKAVWSSNETKAKNPMLQLLNTGNLVLREENITDPTKYVWQSFDYPTDTLLPGMKMGWNLDTGVEKHLTSWTTTGRDPSSGDVSFKIETRGVPEIFLRKDNNITYRSGPWNGERFSGVPEMEPDTDSITFNFSYDKHGVYYSFSIGNPSILSRLVVTWDGQLERLTWVPSSGTWTTFWFAPKDQCDDYRACGPNGVCDSNASPVCTCVRGFKPRNVAAWSLRDGSDGCVRETELDCGSDGFVKVENVKLPETSNVFANRSMSLRECQSLCRRNCSCMGYANIEVSEGGRGCVMWPGQLFDIRKYPAGGQDLYVRLAASDLDDVGSAGGSQSHKTSHVGEAVGITISAAVIILGLVLIFWKRRKLLSTSNVKTAPRGSFHRSRDLLTSEGMFSTNRENSGERSMNDIELPMFDFNTITMATNNFSEENKLGQGGFGIVYRGRLMEGQDIAVKRLSKNSGQGVDEFKNEVKLIVRLQHRNLVRLFGCCVEMDEKLLVYEYMENRSLDSILFDKARKPTLDWKRRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDSEMNPKISDFGMARLFASNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYANDDMNLLGNAWRKWRDGSALELIDSSIGDSYSPSEVLRCIHVGLLCVQERAEDRPTMPSVMLMLSSESALMPQPRNPGFSIGKNPAETDSSSTPLLSLNNKGLEADDAITPPQTISGNKTLVSPSQNFELGFFSPVNSTYIYLGIWYKHIPKQTVIWVANRDKPLVNSGGSLTFSNDGKLILLGHTGSVIWSSNSSAPARNPVAQLLDSGNFVLKDYGNEGSLWESFDYPSDTLIPGMKLGWNFRTGLSRHLTSWKSTSDPSSGEYTYSVDPRGLPQLFLHKGNKKVFRSGPWYGQQFKGDPVLSANPVFKPIFVFDSDEVSYSYETKDTIVSRFVLSQSGLIQHFSWNDHYSSWFSEFSVQGDHCDDYGLCGAYGFCSIKSSPICKCLEGFEPKLPQEWESFQWSGGCVRKNAHVCSNGDAFKQFTGMKLPDADEFHTNYSISINHCEAECSKNCSCVAYAKLDINASGKGCIAWFGNLFDVREVSVNGQDFYVRVPASKLGSNVDGNKRKKLILFPVAASVTSTIIVSALWLIIKKCRRKIAKETGGEFGVGRARSERNEFKLPLFDIAVIEAATGNFSIYNKIGEGGFGPVYKGQLPSGQEIAVKRLSETSGQGLQEFKNEVILISQLQHRNLVKLLGCCIHGEDKMLVYEYMPNRSLDSLLFDENKRSVLSWQKRLDIIIGIARGLLYLHRDSRLRIIHRDLKASNVLLDDEMNPKISDFGMARMFGGDQTEAKTKRVVGTYGYMPPEYAIDGHFSFKSDVYSFGVLLLELLSSKKNKGFLHPDHKLNLLGHAWKLWNEDRALELMDPLLENEFPTREALRCIQVGLSCVQQHPEDRPTMSSVLLMLNSESVLVPQPGRPGLYSERFFSDTNSSSRGAGLNSGSNHITVTLQEGR 1630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02569 1630 Gene3D Transferase(Phosphotransferase) domain 1 600 804 - -
Cca08g02569 1630 Gene3D Transferase(Phosphotransferase) domain 1 1387 1588 - -
Cca08g02569 1630 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Cca08g02569 1630 Pfam S-locus glycoprotein domain 1019 1126 IPR000858 GO:0048544
Cca08g02569 1630 SMART ntp_6 1149 1228 IPR003609 -
Cca08g02569 1630 SMART ntp_6 337 416 IPR003609 -
Cca08g02569 1630 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Cca08g02569 1630 SUPERFAMILY alpha-D-mannose-specific plant lectins 886 992 IPR036426 -
Cca08g02569 1630 CDD B_lectin 28 147 IPR001480 -
Cca08g02569 1630 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 833 1628 - -
Cca08g02569 1630 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 831 - -
Cca08g02569 1630 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02569 1630 CDD PAN_AP_plant 1148 1229 - -
Cca08g02569 1630 ProSiteProfiles Protein kinase domain profile. 1311 1588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02569 1630 SMART serkin_6 524 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02569 1630 SMART serkin_6 1311 1587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02569 1630 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 213 IPR036426 -
Cca08g02569 1630 Pfam Protein tyrosine and serine/threonine kinase 527 791 IPR001245 GO:0004672|GO:0006468
Cca08g02569 1630 Pfam Protein tyrosine and serine/threonine kinase 1313 1579 IPR001245 GO:0004672|GO:0006468
Cca08g02569 1630 SUPERFAMILY Protein kinase-like (PK-like) 500 795 IPR011009 -
Cca08g02569 1630 CDD B_lectin 844 961 IPR001480 -
Cca08g02569 1630 Pfam PAN-like domain 337 402 IPR003609 -
Cca08g02569 1630 Pfam PAN-like domain 1148 1214 IPR003609 -
Cca08g02569 1630 ProSiteProfiles PAN/Apple domain profile. 1148 1229 IPR003609 -
Cca08g02569 1630 SMART blect_4 28 147 IPR001480 -
Cca08g02569 1630 SMART blect_4 843 961 IPR001480 -
Cca08g02569 1630 CDD STKc_IRAK 530 795 - -
Cca08g02569 1630 CDD PAN_AP_plant 333 417 - -
Cca08g02569 1630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1432 1444 IPR008271 GO:0004672|GO:0006468
Cca08g02569 1630 MobiDBLite consensus disorder prediction 1608 1630 - -
Cca08g02569 1630 ProSiteProfiles PAN/Apple domain profile. 337 417 IPR003609 -
Cca08g02569 1630 CDD STKc_IRAK 1317 1583 - -
Cca08g02569 1630 Gene3D Phosphorylase Kinase; domain 1 498 599 - -
Cca08g02569 1630 ProSiteProfiles EGF-like domain profile. 1093 1129 IPR000742 -
Cca08g02569 1630 Gene3D Phosphorylase Kinase; domain 1 1284 1386 - -
Cca08g02569 1630 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 833 1628 - -
Cca08g02569 1630 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 831 - -
Cca08g02569 1630 ProSiteProfiles Bulb-type lectin domain profile. 22 141 IPR001480 -
Cca08g02569 1630 ProSiteProfiles Bulb-type lectin domain profile. 837 958 IPR001480 -
Cca08g02569 1630 Gene3D - 17 144 IPR036426 -
Cca08g02569 1630 Gene3D - 833 958 IPR036426 -
Cca08g02569 1630 SUPERFAMILY Protein kinase-like (PK-like) 1295 1592 IPR011009 -
Cca08g02569 1630 Pfam D-mannose binding lectin 69 172 IPR001480 -
Cca08g02569 1630 Pfam D-mannose binding lectin 885 987 IPR001480 -
Cca08g02569 1630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02569 Cca-Chr8 60043761 60055008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02569 512 820 Receptor kinase-like Gene Family AT4G11530 61.613 3.33e-127 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca08g02569 PK_Tyr_Ser-Thr 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02569 - - itr:116029123 1766.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01350 09 36525728 36539220 Cca08g02569 08 60043761 60055008 PCT