Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02555 ATGTTGAAGGAGAAACTTGGAGTGAAATCAGATAAAGATCTGCCAATGGTGGATTACAGAATACTCAAGTGGGTCACCCAAGATGAAGATGAGCTTAAAGAAACCACCAAGGGTCGAGTCCAAGCAGTAATTCTTGACATGACAAACTTGATGAATGTTGATACTTCCGGAATTCTAGCTCTTGAGGAACTGCACAAGAGGTTGCTTTCACGTGGTGTAGAAGTAAGGCTACTCTGA 237 0.4219 MLKEKLGVKSDKDLPMVDYRILKWVTQDEDELKETTKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVEVRLL 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02555 78 PANTHER SLC26A/SULP TRANSPORTER-RELATED 16 75 - -
Cca08g02555 78 ProSiteProfiles STAS domain profile. 1 78 IPR002645 -
Cca08g02555 78 Pfam STAS domain 20 77 IPR002645 -
Cca08g02555 78 SUPERFAMILY SpoIIaa-like 33 77 IPR036513 -
Cca08g02555 78 Gene3D STAS domain 15 78 IPR036513 -
Cca08g02555 78 PANTHER SULFATE TRANSPORTER 16 75 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02555 Cca-Chr8 59950313 59951241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02555 17 75 Inorganic Solute Cotransporters AT5G10180 45.902 1.42e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02555 K17469 - ccaj:114915106 153.295