Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02538 ATGCAGACGAGGTACATGGAGAAATCCAGGGAGAAGCGAGCCTTAGATTCATCTTCCGCTGAGGATGATCAACCTGAAAGAAAGCGACCTGCTTTGGCTAGTGTAATTGTTGAGGCGCTGAAGGTGGACAGTCTGCAGAAGCTTTGTTCATCACTGGAGCCTATTCTACGTAGAGTTGTCAGCGAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTACAGCCAAGCTTAGTGGGAGGTCGTCTCCCAAGAGCATAGAAGGCCCTGATGACAGCAGTCTACAATTACAATTCAGGAATAGGTTATCCCTTCCCCTCTTTACTGGGGGGAAAGTGGAGGGAGAGCATGGCACCGGCATACACATTGTTTTGGTTGATACAAAAACAGGCCATGTTGTCACATCTGGCCCAGCTTCATGTGCCAAACTAGATTTATTTGTACTTGAAGGAGATTTCAATAATGAGGATGATGATAATTGGAATGAAGAAGATTTTGATAGTCATGTAGTTAAAGAGCGAGAAGGAAAAAGACCTCTTCTGAATGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATACGGAGTAGGAAGTTCAGGTTGGGGCTCAAAGTTTCCCCAGGATGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAACTATACAAGAAACACTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCAGGAATATTTACTGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTACGAAATGTTCTTGGAAGTGGCATGTCAAACAAAATGTGGGATGTTCTTGTTGATCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATACTATACTGATGATGCAAGGAACGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTTTAATTGCCGATGACCAATATTACTCCGCTAATTCTCTCACCGACAGTCAGAAGGTTTATGTGGACACATTGGTGAAGAAAGCATATGAGAACTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATTACAATCAGAATAAGACTTTGGGCACCTCTCAACCTCTGGCTCCATCGGGTTCCCATGATTATTCAATTTCAAACTCACTTGATCCGCAGACCTCCATCCCTAGTCTACCAGTTCCTGTACCCACTGGGCAGCCTTCAACGGATCCAGCAGTAACAGTTGGAGGCTATCATATTAATGGTACGACCACCAGGTGCTCAATGCAACCACAGAATGATAATATTTATTCATCTATTCAGTTTGATAATACTGCATTCCCACTGCAAAACCAGCTAATGAGTGCTTCACACCAATCTCAACTTCCGAGAAATGAAAATGGGCTGACTCATGGTCCACGACAATCAGGCACTCCTGGCTTTCAGAATGTCAGCATTTCAAATCCTACTTATAGAGGATTTGAGGATTACTTCCCAGAGGAGGAGATTCGAACTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAATATGGGAGGAGAATCTCATGCTTCCTTTAATACTCCAGAAGATGCATACCCTTATTCATCTCCTTACATGCCTGCAGCCTCCATGAACTACAACTTAGATGATGAACAAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCTGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACCCATAG 1899 0.4387 MQTRYMEKSREKRALDSSSAEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVPTAKLSGRSSPKSIEGPDDSSLQLQFRNRLSLPLFTGGKVEGEHGTGIHIVLVDTKTGHVVTSGPASCAKLDLFVLEGDFNNEDDDNWNEEDFDSHVVKEREGKRPLLNGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSPGCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIFTVEDVVRLVVRDPQRLRNVLGSGMSNKMWDVLVDHAKTCVLSGKLYVYYTDDARNVGVVFNNIYELSGLIADDQYYSANSLTDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNKTLGTSQPLAPSGSHDYSISNSLDPQTSIPSLPVPVPTGQPSTDPAVTVGGYHINGTTTRCSMQPQNDNIYSSIQFDNTAFPLQNQLMSASHQSQLPRNENGLTHGPRQSGTPGFQNVSISNPTYRGFEDYFPEEEIRTRSHEMLENEDMQHLLRIFNMGGESHASFNTPEDAYPYSSPYMPAASMNYNLDDEQNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02538 632 MobiDBLite consensus disorder prediction 403 426 - -
Cca08g02538 632 PANTHER CALMODULIN-BINDING PROTEIN 6 630 - -
Cca08g02538 632 MobiDBLite consensus disorder prediction 403 428 - -
Cca08g02538 632 PANTHER OS02G0177800 PROTEIN 6 630 IPR012416 GO:0005516
Cca08g02538 632 MobiDBLite consensus disorder prediction 487 515 - -
Cca08g02538 632 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Cca08g02538 632 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Cca08g02538 632 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Cca08g02538 632 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02538 Cca-Chr8 59711776 59716904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02538 9 627 Calmodulin-binding Proteins AT5G57580 60.938 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02538 - - gmx:100802994 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01318 09 35917289 35923099 Cca08g02538 08 59711776 59716904 PCT