Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02416 ATGGCGAATGTTTCAGAGGGAACTTTAGAAAACACACCAACATGGGCTGTGACAACAGTTTGCTTCGTATTGCTAGTAATCTCTATTTCCATTGAGCAGTTGCTCCATCTTTTGGCCAGGTATTTCAAAAGGAAGAGGAGGAAGTCACTCACTAAGGCCCTTGAAAAGATCGAATCAGAATTGATGCTTCTGGGTTTCATGTCTCTGCTGCTAACGGTGAGTGAAAAACGGATTGCAAATATTTGCATAACAAAGAGTGTTGGTGAAACTCTTCTTCCCTGCGCAACCATGACTTTTGACGTGACCAAGGAAGAAACAAAATGTGCCGAGCAGGGCAAAGTATCATTGGTGTCGAGGAAAGGTGTCCGAGAGTTGCAGTACTTCATCTTTTATCTGGCTTTGTGTCATGTTATTTCTTGCATTCTCACCTTTAGTCTTGGAATGGCGAAGATGAGACGATGGGAGTCTTGGGAAGCAGAAACTAGAACATTGGAATATCAGTTTCAATATGATCCACGGAGGTTTCAGCTCACACGTGAGACATCATTTGGGAAGCGGCATCTTAACTATTGGAGTAACAACCCTATACTGTTTTGGCCTGTCTGTCTTGTTAGACAATTTTATAGATCTGTCCCCAAGGTTGATTACTTCACTCTTCGACGTGGATTCATCACGgcccattttgcagaaggaagtaactttgacttccaaaattttattaaacgggctttggagaaagattttggagtggtaatgggaataagctggtggatttggatcttctctgtactgtacatattcttgaatgcaaatGTATTCTACAGCCATTTCTGGTTACCGTTTAGTCCGCTAATGGTGCTTTTGTTGGTGGGAACAAAGCTACAAGGCATTGTAACACATATGTGTTTGGATAGTGATGACAAATCCCAAATAATCAAAGGAAGTTTGCTTGTGAGGCCCAGTGACCACTTTTTCTGGTTTGGATGGCCCAATCTGCTGCTTCATCTCATTAGCTTCGTATTGTTTCAGAATTCCTTCCAAGTAGCATTTTTCACATGGACTTCGATCCGATTCGGGATCAGATCATGTTTTCATCGAGGAATTGAGAATATCATCATAAGGGTAGCAATGTGTGTTTCGGTACAAATCCTCTGTGGCTATGTAACACTACCTCTCTATGCTTTGGTAACTCAGATGGGTACCTCAATGAGCAAGGATGTGTTTGCGGAGAATGTGATTAGAGGCATCCACATTTGGCGTGAGAAGGCGAAAAAGAATGTGGCTCATAGGAATCCACATTCACAAGACTCATCTTTAGACACTTCCCTTTCGCTTGAAATTTCACTAGAGTCACCTTCTTTCAGGTTTGATGTATCCACCTCCATTTTAATGGATCGTTCATCAGATGATAATAAGCACGTGGCTGTTACGGAAGAAAATATATCGAGTGAACAACTAGGTTCATTTCAAGGATTTCATCTGCAAAACACAGGAAAACCAAGGCAATTTTGA 1512 0.381 MANVSEGTLENTPTWAVTTVCFVLLVISISIEQLLHLLARYFKRKRRKSLTKALEKIESELMLLGFMSLLLTVSEKRIANICITKSVGETLLPCATMTFDVTKEETKCAEQGKVSLVSRKGVRELQYFIFYLALCHVISCILTFSLGMAKMRRWESWEAETRTLEYQFQYDPRRFQLTRETSFGKRHLNYWSNNPILFWPVCLVRQFYRSVPKVDYFTLRRGFITAHFAEGSNFDFQNFIKRALEKDFGVVMGISWWIWIFSVLYIFLNANVFYSHFWLPFSPLMVLLLVGTKLQGIVTHMCLDSDDKSQIIKGSLLVRPSDHFFWFGWPNLLLHLISFVLFQNSFQVAFFTWTSIRFGIRSCFHRGIENIIIRVAMCVSVQILCGYVTLPLYALVTQMGTSMSKDVFAENVIRGIHIWREKAKKNVAHRNPHSQDSSLDTSLSLEISLESPSFRFDVSTSILMDRSSDDNKHVAVTEENISSEQLGSFQGFHLQNTGKPRQF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02416 503 PANTHER MLO-LIKE PROTEIN 1 8 448 IPR004326 GO:0006952|GO:0016021
Cca08g02416 503 Pfam Mlo family 8 102 IPR004326 GO:0006952|GO:0016021
Cca08g02416 503 Pfam Mlo family 103 438 IPR004326 GO:0006952|GO:0016021
Cca08g02416 503 PANTHER MLO-LIKE PROTEIN 8 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02416 Cca-Chr8 58290348 58294442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02416 4 441 MLO family AT2G39200 47.579 1.46e-157 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02416 K08472 - gmx:100775859 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02416 08 58290348 58294442 Cca08g02416 08 58290348 58294442 ECH