Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02413 ATGGCTCTTCCACTCGTGAAGCTCGGAACTCTCGCCCTCAAAACCCTCAGCAAACCCGTCGCCAGTAGGCTCAAGCAGCAGGCCGCTCTTCACCCCAGGTTCCGCCACATCATCGTTAGCATGGCGCAGGCCAACCATCAAATCACCACCAAGATGCAGAGGCGCATCTACGGCCACGCCACGGATGTTGAGATTCGCCCATTGAACGAGGAAAAGGCTGTTCAGGCTGCTGTTGACCTTATTGGGGAACTCTTTGTCTTCTCGGTTGCAGGAGTTCTCTTGATCTTTGAGGTACAAAGAAGTGCTAGATCTGAGGCAAGAAAGGAGGAAGTACGAAAGCAAGAGCTGGGGGCTGTGAAGCAAAAAACTGAGAACTTGGCTGAAGAAGTAGAACTTCTTAAGCATAGAATTCAAGAACTGGAACAGATGGCCAGGGGACGAGGACTGACTGGCATTCTAAACTTCAAACATGGCAATGTTGTGTTTCAGATGATGGTATCCACCGCATGTGATCCCGATTGCGCGAGCACAATCAACCACCCCACTATGCCCCCTTCTAGGTTTTGCTTAGGGAAAATAGAGGGTTATGGACATGACATGTGGATGGTCCGAATGATAAGCCATGGGATGCAGCAACATATATTCTTCAATCTCCACTTAACTGTAACTGTATTGTCCCTATGCTTTTTTCTTCTTCTGTTTTTTGGTTGTCCCCTTTCACACACACTGATCTCGTCAGTGGAGAAAGGGAAGGAGAGGAAAAGAGAACAGATTAAAAAGAGGAAAAAAAGAAAAAAGGAAGCATATTCTCTCTCTTCTCCCTTTCCATCTCCTTATAAATCTTTCTCTGAACGGAGAGAGAGAGAGAGTATTGAACCTTCTATCTTTAATAGAGAATTTGGAGCCTCAGGGTCTTGTAGGCAGGACTTGAAGTTTGGTGATGAAGAAAATTTCCAAGAGCAGCTGCAATTTGCCAGGAAGGAGAGCCGTACGGTTGATGCTGCACTTCTTGAGGAGCAAGTCCATCAAATGCTTCGTGAGTGGAAGGCTGAGCTCAATGAACCATCTCCTGCTTCTTCTTTGCAACAAGGTGGCAGTCTTGGATCCTTCTCGACCGATGTTTATAGGCTATTGCAGCTCTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGTTGCACCTAAGCCTGAACCTAATGATCTGACTATGCAGGTTGGGGCTAAGGTCATAGTCCAAGAGGGCCAACATCAACAGGATTTCCTGTTGCTTAGCGAATGCAAACCCTCCACTGTAGGAATTCCCAACTTGGATGGGCCTGCTCTAGAGTATCATCAATTTGACTTCAATAAGAACTTGGATCACAGCTTTTATGCTGGTACAAGATTTTGTGAGGAAGATGGTGTTCCTCACATATCTAGCTATCTGCCAAGTGCCTGCCCTCCTCCTTCTGCTTTCTTAGGTCCGAAATGTGCACTTTGGGACTGTCCGAGGCCTGTACAAGGCTTGAACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTTCTCTAGCTTTAAACGAAGGACCACCAGGCATGACTCCAGTTCTAAGACCTGGGGGGATTGGACTTAAGGATAATCTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTACAAAATCTCCATGGAATGCACCTGAGCTCTTTGATATTTGTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTTTTCTTTGACAAGCCTAGAAGAGCATTTGAGAGTGGAAACAGGAAGCAGAGATCATTGCCAGATTATAGTGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCACTGAACCATTTTGAGTGGCACCTTTATGAGTATGAAATAAGCAAGTGTGATGTTTGTGCCTTGTACAGGTTGGAACTAAAGCTTGTTGATGGGAAGAAGAGCTCAAAGGCAAAGCTAGTAACAGGAACAACAAGACAAGGTGATTTTTTTTCCTTGTCAAGACACTGTGAAGTGTGA 2097 0.4592 MALPLVKLGTLALKTLSKPVASRLKQQAALHPRFRHIIVSMAQANHQITTKMQRRIYGHATDVEIRPLNEEKAVQAAVDLIGELFVFSVAGVLLIFEVQRSARSEARKEEVRKQELGAVKQKTENLAEEVELLKHRIQELEQMARGRGLTGILNFKHGNVVFQMMVSTACDPDCASTINHPTMPPSRFCLGKIEGYGHDMWMVRMISHGMQQHIFFNLHLTVTVLSLCFFLLLFFGCPLSHTLISSVEKGKERKREQIKKRKKRKKEAYSLSSPFPSPYKSFSERRERESIEPSIFNREFGASGSCRQDLKFGDEENFQEQLQFARKESRTVDAALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDLTMQVGAKVIVQEGQHQQDFLLLSECKPSTVGIPNLDGPALEYHQFDFNKNLDHSFYAGTRFCEEDGVPHISSYLPSACPPPSAFLGPKCALWDCPRPVQGLNWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPECEGAATTKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELKLVDGKKSSKAKLVTGTTRQGDFFSLSRHCEV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02413 698 PANTHER TRANSCRIPTION FACTOR VOZ1 317 681 - -
Cca08g02413 698 MobiDBLite consensus disorder prediction 250 286 - -
Cca08g02413 698 PANTHER TRANSCRIPTION FACTOR VOZ1 317 681 IPR039277 GO:0006355|GO:0048578
Cca08g02413 698 Pfam Optic atrophy 3 protein (OPA3) 6 126 IPR010754 -
Cca08g02413 698 Coils Coil 123 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02413 Cca-Chr8 58241627 58251154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02413 322 679 VOZ-9 Transcription Factor Family AT1G28520 71.968 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Cca08g02413 OPA3 3.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02413 - - gmx:100784593 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02413 08 58241627 58251154 Cca08g02413 08 58241627 58251154 ECH