Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02406 ATGGACAAACAACATAAAGTGATTCTTCTGCTGTTGCTTCTTTTCCAAGTTCTGCTTGTAGCATCACAGACAGACAATCGAGATTATTCTGGCCTAAATTCTTTTACGCAATCCTGGAGTAACAAGCCACAAAATTGGGTGGGTTCAGATCCTTGTGGTAGTGGATGGGATGGAATCCGTTGCAGCGGTTCAAGAATTACCCAATTGAAACTACCAGGCTTGAATTTGGGGGGCCAGCTGTCTTCGGCAATTCAGTCTTTAACTGAACTAGATACTGTGGATCTTTCATACAACACGGGCTTGACAGGAACAATTCCGAAAGAAATTGGGAATTTGAAAAAACTAAAATCCCTAGCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCAGATTCAATAGGGTCTCTAACGCAGCTGACCTTTCTAGCACTGAATTCTAATAAGTTTAGTGGAAGTATACCACGCTCTCTGGGAAATCTATCAAATATTGATTGGCTTGATCTTGCTGAAAACCAGCTTGAAGGGACTATTCCTGTCTCTGATGACCAAGGACGACCTGGCCTTGACCTGCTTCTTAAGGCTCAACACTTTCATATGGGGAGCAATAAGCTCTCTGGTACAATACCATCAAAACTTTTTTCCTCCAGTATGAGACTACAACACTTGCTTTTCGACCACAATCAACTAGAGGGTAGTATTCCTAGAAGCATTAGTTCTGTGAGTTCATTGGAGGTTGTGCGCTTTGATGCCAATCAGTTAATTGGGGGACTGCCTTCAAACTTCAACAATCTCGGAAAACTTAGTGAGCTCTATTTATCTCACAATAAGATGAATGGCTCTCTGCCCGATCTTACTGGAATGAATAGTCTCACCTATGTGGACATGAGCGACAATAGTTTCAATGCTACTAATATTCCTTCATGGGTTTCAAATCTGCCAGGACTGACAACAGTGATACTTAAGGACAACCAGCTCAGTGGCTCATTAAATCTCAGCGAGTACAGCAATAGTCTGCAACTCATGAATTTGGAGGATAATGGAATAACAGGACTTGACCCGGAAAACAATTTACCAAGTTTTGATCTAAGACTAGCTAACAATCCAATTTGTCGTGAAAGTGGAGCTCTTGAAAGGAGTTATTGCAAAGTGCCTCAAACCGTTCCCTCTTATTCAACGCCACCAAATAATTGTGTACCTCAATCTTGCGGTTCCAATCAGATTTCCAGCCCCAATTGTAAATGTGCATTTCCCTATACCGGACTTCTTATATCAAGAGCTGTTAGTTTCTCAAACTTCAGTAACACAAGTTACTATAGGGAGCTTGAGCAGACTCTGCTGGATACTTTTCAAAAGCAACGTGTTCCAGTGGATTCAGTTTCTCTTAGTAACCCCTTCAGGAATTCAACTTCTGATAACTTTCAATTGACTATGGATATCTTCCCTTCTCAAACCGATCGTTTCAACACAACTGGAGTTTTAACTATTGCTTTTCTGTTTAGCAACCAAATTTACAAACCCCCAGAATTCTTCTCCCCTTACGTCTTCGAGGGTGCTAGTTATGACTACTACGGAGGAGAACCAAAAAACTCAAAGTCATCACATACAGGGGTTATAGTTGGTGCAGTAGTTGCAGTTTTGGTCTTTGTTGTACTAGCATTCCTTGCAGGGATGTATGCCATTCGCCAGAAAAGAAGAGCAAAAAGATCTTCAGAGTTGAACCCTTTTGGAAATTGGGAACAGAATAAGAATAGTGGCACTGCTCCTCAGTTGAAAGGAGCTAGATGGTTTTATTTTGATGATCTAAGGAAATACACCAACAACTTCTCAGAAGCCAATACTATTGGATCCGGAGGCTATGGAAAGGTTTACCAAGGAAACCTTCCCTCTGGGGAGTTGGTTGCCATCAAACGGGCTGCAAAAGAGTCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATCGAACTTCTCTCGAGGGTCCATCATAAGAATCTGGTTGGTCTTGTGGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCAAATGGCACTTTAATGGATAGTCTCTCGGGAAAATCTGGGATCTGGATGGATTGGATAAGgaggcttaaagtagcattaggtgcagccaggggtctggcctatcttcatgaacttgctaacccacctatcatacacagggacataaaatcaagcaacatcctacttgatcatcacctcaacgcgaaagttgcagattttggtctctcCAAACTTCTTGTTGACAGTGATAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGggatacttggatcctgaatattacatgacccagcagttgactgaaaagagtgatgtataTAGCTATGGAGTGCTAATGCTGGAACTAGCAACAGCAAGAAGGCCAATAGAGCAAGGAAAGTACATTGTAAGAGAGGTAATGAGGGTAATGGACACATCCAAAGATTTATACAACCTTCACTCTATTCTAGACCCAACCATAATGAAAGGAACAAGACCAAAAGGTTTAGAAAAGTTTGTGGCGTTGGCAATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCTACAATGGCTGAGGTTGTGAAAGAGATTGAGAGCATAATCGAGCTTGTTGGATTGAACCCCAATTCTGAATCAGCTACAACATCAGAAACTTATGAGGAAGCAGGTGGAGTAAATGCTCAACATCCGTACCGGGAAGAAGATTTTAGCTACAGTGGAATTTTTCCATCAACAAGGGTAGAACCCCAATAG 2793 0.3878 MDKQHKVILLLLLLFQVLLVASQTDNRDYSGLNSFTQSWSNKPQNWVGSDPCGSGWDGIRCSGSRITQLKLPGLNLGGQLSSAIQSLTELDTVDLSYNTGLTGTIPKEIGNLKKLKSLALVGCGFSGPIPDSIGSLTQLTFLALNSNKFSGSIPRSLGNLSNIDWLDLAENQLEGTIPVSDDQGRPGLDLLLKAQHFHMGSNKLSGTIPSKLFSSSMRLQHLLFDHNQLEGSIPRSISSVSSLEVVRFDANQLIGGLPSNFNNLGKLSELYLSHNKMNGSLPDLTGMNSLTYVDMSDNSFNATNIPSWVSNLPGLTTVILKDNQLSGSLNLSEYSNSLQLMNLEDNGITGLDPENNLPSFDLRLANNPICRESGALERSYCKVPQTVPSYSTPPNNCVPQSCGSNQISSPNCKCAFPYTGLLISRAVSFSNFSNTSYYRELEQTLLDTFQKQRVPVDSVSLSNPFRNSTSDNFQLTMDIFPSQTDRFNTTGVLTIAFLFSNQIYKPPEFFSPYVFEGASYDYYGGEPKNSKSSHTGVIVGAVVAVLVFVVLAFLAGMYAIRQKRRAKRSSELNPFGNWEQNKNSGTAPQLKGARWFYFDDLRKYTNNFSEANTIGSGGYGKVYQGNLPSGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDHHLNAKVADFGLSKLLVDSDRGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSYGVLMLELATARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTIMKGTRPKGLEKFVALAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEAGGVNAQHPYREEDFSYSGIFPSTRVEPQ 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02406 930 Gene3D Ribonuclease Inhibitor 283 387 IPR032675 -
Cca08g02406 930 Gene3D Transferase(Phosphotransferase) domain 1 684 897 - -
Cca08g02406 930 SMART serkin_6 608 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02406 930 Gene3D Ribonuclease Inhibitor 184 282 IPR032675 -
Cca08g02406 930 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Cca08g02406 930 SUPERFAMILY L domain-like 44 371 - -
Cca08g02406 930 CDD STKc_IRAK 614 880 - -
Cca08g02406 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Cca08g02406 930 Pfam Protein kinase domain 609 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02406 930 Gene3D Phosphorylase Kinase; domain 1 578 683 - -
Cca08g02406 930 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 2 911 - -
Cca08g02406 930 PANTHER RECEPTOR-LIKE PROTEIN 55 2 911 - -
Cca08g02406 930 ProSiteProfiles Protein kinase domain profile. 608 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02406 930 ProSitePatterns Protein kinases ATP-binding region signature. 614 640 IPR017441 GO:0005524
Cca08g02406 930 SUPERFAMILY Protein kinase-like (PK-like) 587 876 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02406 Cca-Chr8 58192134 58201770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02406 8 930 Receptor kinase-like Gene Family AT5G49760 52.316 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Cca08g02406 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02406 - - gmx:100786172 1610.51