Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02400 ATGGGGGCTTCTGATGCTCACTTGTTTCTTTCTCTAGTGCACATTTTCATACTATGTTTCATGGCCAAAGTTGAAGCTTTAAACAAAACGGTCTCAGGCTTTTATGTGTTTGGAGACTCCACGGTAGACCCGGGAAACAACAACTACATAGAGACAGCTTTCAGGAGCAATTTTCCACCTTATGGAAGGGATTTTTCCAACCAAGTTCCTACAGGGAGATTTACCAATGGGAAGCTTGCCACTGATTACATTGCTTCATACGTAGGTCTCAAGAAAGAGATTCTTCCACCTTATTTGGACCCAAACCTCAACAATATTGAAGAGCTTATGACAGGAGTTAGTTTTGCCTCCGCTGGTTCTGGCTTTGACCCACTAACACCAACCATCACTAATGTAATTCCGATAGAAAAGCAGGTGGAATATTTGAGAGAATGCAAAAAGAGAATGGAGGATGCGGTGGGTAAGCAGAGAAGTGAAAATCATGTGAAGAATGCGGTGTTCTTCGTGAGTGCTGGTACGAATGACTTCGTTCTTAATTACTTTGCTCTACCAGTACGAAGAAAGACCTACACTCTCCTAGCCTACCACCACTTCTTAATCCAACATGTGAAAAACTTTTTACAGGATTTGTTGGCAGAAGGTGCTCAAAAAATTGCAGTAAGTGGAATACCTCCAATGGGATGCTTACCTCTCATGATCACCATGAATTCCCCAGATGCCCTTTTCCAGCGTCATTGTATTGACAAATATTCCTCCATTGCAAGAGATTTCAATCTACTCCTTCAGAACGAATTACACCAAATGCAATTGCAGCTCAACATGTCTAATTCAGATGCTAAGATCTACTACGTTGACATATATCAACCCATAGCCGATATGATTCAAGCACATGAAAAATTTGGTTCGTAA 909 0.4125 MGASDAHLFLSLVHIFILCFMAKVEALNKTVSGFYVFGDSTVDPGNNNYIETAFRSNFPPYGRDFSNQVPTGRFTNGKLATDYIASYVGLKKEILPPYLDPNLNNIEELMTGVSFASAGSGFDPLTPTITNVIPIEKQVEYLRECKKRMEDAVGKQRSENHVKNAVFFVSAGTNDFVLNYFALPVRRKTYTLLAYHHFLIQHVKNFLQDLLAEGAQKIAVSGIPPMGCLPLMITMNSPDALFQRHCIDKYSSIARDFNLLLQNELHQMQLQLNMSNSDAKIYYVDIYQPIADMIQAHEKFGS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02400 302 PANTHER GDSL ESTERASE/LIPASE EXL3 7 301 - -
Cca08g02400 302 Pfam GDSL-like Lipase/Acylhydrolase 35 288 IPR001087 GO:0016788
Cca08g02400 302 CDD SGNH_plant_lipase_like 34 301 IPR035669 -
Cca08g02400 302 Gene3D SGNH hydrolase 21 302 IPR036514 -
Cca08g02400 302 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02400 Cca-Chr8 58126152 58130415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02400 10 301 Pollen Coat Proteome AT1G75910 33.333 2.37e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02400 - - gmx:100788326 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02400 08 58126152 58130415 Cca08g02400 08 58126152 58130415 ECH