Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02399 ATGGAAATGGTGAAAATGATGATACTAGCACTGACCATGATGATGATGCCATTATGTTCACTTGCTGTGGACATTCATCTAGTGAGGCAACTAGCAGCTAAGTATAACGTGAGTTGCATCCTTGTTTTTGGTGATTCAAGTGTTGATTCTGGAAACAACAATGCCCTTCACACCACTATGAAAAGCAATTTTCTTCCTTATGGCAAAGACTTCTTTAACAGCCAACCAACAGGAAGGTTTAGTAATGGAAGACTTACCACTGACTTCATTGCTGAAGCAGTGGGGTACAGAAAAGTGATTCCACCTTTTCTTGACCCAAATTTGAAGCCAGAAGATCTGCCATATGGTGCTAGTTTTGCATCAGCAGCCACAGGTTTTGATGATTACACTGCTGAAGTTTCGAATGTTTTGTCTGCTTCAAAACAGCTGGAGTATTTTGAGCATTATAAGATCCACTTGAGAAAATTGGTGGGAAAAGCAAGAGCAGATTTCATAACAAGAAATGCATTGTATATAATGAGTATGGGTACAAATGACTTTCTGCAGAATTATTTCTTGGAACCAGCTCGCCCTAAGCAATTCAGCTTGCAAGAATTTGAGAATTTCTTGATCTCACGCTTCTCTAAGGACGTTCAGGCAATCCATAGACTGGGTGCGAAAAGGTTGGTGGTTGTAGGGGTCCCACCTCTGGGATGCGTTCCACTTATGAAGACAATTTTGAACCAAGAAGAAGGATGTGTTGAACGTTTGAACAAAGTAGCTTACCAATTCAATGCAAAATTATCACAACAATTAGACAACTTAAAGACAAATTTGGGCTTAAAGGCTACACTAATTGATGTTTTTGGTATTATCCAAAATGCGGTGACCAATCCTAAAAAATACGGATTTATCGAAAGTTCAAAAGGATGTGTTGGGACAGGGACAATAGAATATGGAGATTCATGCAAAGGGGCAAGAACTTGTTCAAATCCAGACAACTATGTATTCTGGGATGCTGTTCATCCAACCCAGAAGATGTACAAGATCATTGCTGATGAGGCCACTGAATCTGTTGTTAAAGAATTCTTTTGA 1074 0.3939 MEMVKMMILALTMMMMPLCSLAVDIHLVRQLAAKYNVSCILVFGDSSVDSGNNNALHTTMKSNFLPYGKDFFNSQPTGRFSNGRLTTDFIAEAVGYRKVIPPFLDPNLKPEDLPYGASFASAATGFDDYTAEVSNVLSASKQLEYFEHYKIHLRKLVGKARADFITRNALYIMSMGTNDFLQNYFLEPARPKQFSLQEFENFLISRFSKDVQAIHRLGAKRLVVVGVPPLGCVPLMKTILNQEEGCVERLNKVAYQFNAKLSQQLDNLKTNLGLKATLIDVFGIIQNAVTNPKKYGFIESSKGCVGTGTIEYGDSCKGARTCSNPDNYVFWDAVHPTQKMYKIIADEATESVVKEFF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02399 357 PANTHER GDSL ESTERASE/LIPASE 8 354 - -
Cca08g02399 357 PANTHER GDSL ESTERASE/LIPASE EXL3 8 354 - -
Cca08g02399 357 CDD SGNH_plant_lipase_like 39 346 IPR035669 -
Cca08g02399 357 Gene3D SGNH hydrolase 25 355 IPR036514 -
Cca08g02399 357 SUPERFAMILY SGNH hydrolase 169 350 - -
Cca08g02399 357 Pfam GDSL-like Lipase/Acylhydrolase 40 347 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02399 Cca-Chr8 58116918 58125391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02399 18 352 Pollen Coat Proteome AT1G75910 32.378 7.20e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02399 - - gmx:100812614 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02399 08 58116918 58125391 Cca08g02399 08 58116918 58125391 ECH