Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02393 ATGGGTTCTGGTGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCTAAAGACGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAGCAATTATAAAGGAAAAGAGAATAGTGGTTTAGCAAATGGTATTACAAGCAAAAACCTGGTGTCAGCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTTCGAGCTTATAAGGCTAGAAAAGTTTTGCGTCGCATGAAAGGGTTTACAAAACTGAAGATCCTAACAGAAGGCTTCTCTGCTAAAAAGCAAGCCAGTACGGCCATAACATACCTTCATTCATGGAGCAAGATACAGGCTGAGATTAGAGCTCGCCGAATCTGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAGCTAGAGTCCCAACTAAAATTGGAGGCAAAACTTCATGATCTGGAGGTTGAATGGTGTGGTGGTTCTGAAACCATGGAAGAAATCGTTGGAAGGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGTGAAAGAGCCATGGCATATGCCTTTTCTCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTCGGTGATTATGAACTTAGCAAAGCTAATTGGGGTTGGAGCTGGAAGGAGCGCTGGATCGCTGCTCGCCCATGGGAAAGCCGTGTCCCCAGCTTACCCGTGAACCCGAAGAAAGCTCAGCATAAGCAGTCAAGCAAGGTTCAGAAGGATAAGAACACACCAACACCAACACCTAAAACTCCTGTCTCAGTTAAACCTCTTTCTGCCAATACAAAAGGGACTCCTCCTTCTGCCAATGCAAAAGGGGCTTCAAAGGCTAGGAGATTGTCTTATCCACCAACTGAGATAACTGCGGTTCAAGAGGAAGTGCATTGA 930 0.4452 MGSGDWFKTIISLRKSKDGRSKKAKGILAQEKLNASKSSNYKGKENSGLANGITSKNLVSAGVSVETIAATRIQTAFRAYKARKVLRRMKGFTKLKILTEGFSAKKQASTAITYLHSWSKIQAEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWCGGSETMEEIVGRIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGDYELSKANWGWSWKERWIAARPWESRVPSLPVNPKKAQHKQSSKVQKDKNTPTPTPKTPVSVKPLSANTKGTPPSANAKGASKARRLSYPPTEITAVQEEVH 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02393 309 MobiDBLite consensus disorder prediction 254 283 - -
Cca08g02393 309 PANTHER IQ-DOMAIN 9 1 300 - -
Cca08g02393 309 PANTHER IQ-DOMAIN 5-RELATED 1 300 - -
Cca08g02393 309 MobiDBLite consensus disorder prediction 234 309 - -
Cca08g02393 309 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02393 Cca-Chr8 58002315 58006957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02393 1 297 IQD Protein Family AT2G33990 52.189 3.32e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02393 - - gmx:100813685 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02393 08 58002315 58006957 Cca08g02393 08 58002315 58006957 ECH