Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02365 ATGCCTCCTCCACTCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCAGAAGCACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCACGGCCATACGAAGAAGACCCACCGCACCGACGTCCAGTGCAAGAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCTCCTCCAACGGCGCTGTCTCTTCCTCCTGGCCTTTCTTCGACCGCTTAGACGCCCTCATCGGCCCTAATTTCACCGCCAAGAAAtcctcctcctccccctcgccttctccgcctgtcgcgcttccgctcctccCGCATCGGAAGAACAACCCCTCCCCCCCCGCGATTGCCGTCCCTCCCACCGCCGTCGCTCTCCCCCAGAAGCGCTCTGCCGCCGCCGCGATGGACGAGGGCTACTTCCGGAGGAACTACTCCgctgtggctgctgctgccgctgcggccgaggctgacgaggaggatgacgaggaagaggaggaggaggaggaggagcccgaagaggaggaggtcgaggaggaggaggatgagggcagggggagcgaggtggaggagggggataaggagagggaagggatgaggaggTTGGCCAGGGCGATTGAGAGGTTTGGTGAAGTTTACGAGAGAGTGGAGGGGCAGAAGCTCAGGCAGATGGTGGATTTAGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGGTCTAACGATATGCATAGCTAG 954 0.3973 MPPPLSSTPGAAATSSSTAATSARRTGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKHWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGAVSSSWPFFDRLDALIGPNFTAKKSSSSPSPSPPVALPLLPHRKNNPSPPAIAVPPTAVALPQKRSAAAAMDEGYFRRNYSAVAAAAAAAEADEEDDEEEEEEEEEPEEEEVEEEEDEGRGSEVEEGDKEREGMRRLARAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNDMHS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02365 317 MobiDBLite consensus disorder prediction 132 170 - -
Cca08g02365 317 PANTHER OS05G0560600 PROTEIN 62 313 - -
Cca08g02365 317 MobiDBLite consensus disorder prediction 1 26 - -
Cca08g02365 317 MobiDBLite consensus disorder prediction 203 236 - -
Cca08g02365 317 MobiDBLite consensus disorder prediction 8 25 - -
Cca08g02365 317 Pfam Myb/SANT-like DNA-binding domain 61 128 IPR044822 -
Cca08g02365 317 MobiDBLite consensus disorder prediction 144 169 - -
Cca08g02365 317 Coils Coil 198 231 - -
Cca08g02365 317 MobiDBLite consensus disorder prediction 199 249 - -
Cca08g02365 317 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 62 313 IPR044823 -
Cca08g02365 317 Coils Coil 62 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02365 Cca-Chr8 57579592 57585206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02365 62 316 Trihelix Transcription Factor Family AT3G14180 30.183 2.21e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Cca08g02365 Myb_DNA-bind_4 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02365 - - gmx:100815241 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02365 08 57579592 57585206 Cca08g02365 08 57579592 57585206 ECH