Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02353 ATGGAGAATAAGAAAACAATTCTGCTGCAAAAGTACGAAGTTGGGCGTTTGCTTGGTCAAGGAAACTTCGCCAAAGTTTATCATGCAAGAAACCTGAAGACAGGCCAGAGCGTGGCCATCAAAGTCTTCAACAAAGAGATGGTGACGAAGGTGGGGTTGAGGGACCAAATCAAGTGCGAAATCTCTGTGATGCGCCGTGTGAGGCACCCCAACATTGTGCAGCTGTACGAGGTCATGGCAAGCAAGACAAAGATATATCTTGCAATAGAATTGGTGAAAGGTGGTGAACTTTTTGATAAAGTGTCCCGAGGGAAGCTGAGGGAGAATGTTGCAAGAAAATATTTCCAACAGCTTATTGATGCTGTTGATCATTGTCACAGCCGTGGGGTGTGTCACCGTGATCTCAAGCCAGAGAATCTTCTCCTTGACGAAAATGGGGACCTCAAGGTTTCGGATTTTGGTTTGAGTGCATTGGCGGAATCAAGGAAGAATGATGGCCTTCTTCACACAACATGTGGAACTCCATCTTATGTGGTTCCTGAGGTGATAAGGAAGAAAGGATATGAAGGAACCAAGGCAGATATTTGGTCTTGTGGGGTGATTCTCTTTGTTCTCTAG 618 0.4531 MENKKTILLQKYEVGRLLGQGNFAKVYHARNLKTGQSVAIKVFNKEMVTKVGLRDQIKCEISVMRRVRHPNIVQLYEVMASKTKIYLAIELVKGGELFDKVSRGKLRENVARKYFQQLIDAVDHCHSRGVCHRDLKPENLLLDENGDLKVSDFGLSALAESRKNDGLLHTTCGTPSYVVPEVIRKKGYEGTKADIWSCGVILFVL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02353 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Cca08g02353 205 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 205 - -
Cca08g02353 205 PANTHER - 2 205 - -
Cca08g02353 205 Pfam Protein kinase domain 12 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02353 205 Gene3D Transferase(Phosphotransferase) domain 1 2 205 - -
Cca08g02353 205 ProSiteProfiles Protein kinase domain profile. 12 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02353 205 SMART serkin_6 12 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02353 205 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Cca08g02353 205 SUPERFAMILY Protein kinase-like (PK-like) 8 205 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02353 Cca-Chr8 57440865 57441482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02353 1 205 CBL-interacting serine-threonine protein kinases AT5G45820 77.073 6.98e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca08g02353 Pkinase 9.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02353 K07198 - gmx:100807927 357.451