Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02311 TCCATGAGTTTGTTCTGGTGGGTGGTTCCACTAGAATTCCCAAGGTGCAGCAACTTCTGAAGGACATGTTCAGCGTGAATGAGCTTTGCAAGAGCATAAACCCAGACGAGGCTGTAGCATACGGTGCAGCTGTTCAAGCAGCGATTTTGAGTTGTGAAGGGGACAAGAAGGTGGAGAAGTTGTTGTTGCTGGATGTGATGCCACTTAGTCTTGGTATTGAGACCAGTGGTGGTGAAATGTCAGTGTTGATTCCCAAGAACACCATGATCCCCACCAAGAAAGAGAGAGTTTTCTCCACGTTTTCTGATAACCAAACGAGCGTTTTGATCAAAGTGTACGAGGGGGAGCAAACCAAGACAGAGGATAACTTCCTTCTAGGGAAGTTTGAGCTTTCGGGGTTCACTCCATCGCCGAGGGAGGTCCCTCAGATCCACGTTGG 439 0.4852 HEFVLVGGSTRIPKVQQLLKDMFSVNELCKSINPDEAVAYGAAVQAAILSCEGDKKVEKLLLLDVMPLSLGIETSGGEMSVLIPKNTMIPTKKERVFSTFSDNQTSVLIKVYEGEQTKTEDNFLLGKFELSGFTPSPREVPQIHV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02311 145 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 1 145 - -
Cca08g02311 145 Gene3D - 33 47 - -
Cca08g02311 145 Gene3D - 2 32 - -
Cca08g02311 145 Pfam Hsp70 protein 2 145 IPR013126 GO:0005524|GO:0140662
Cca08g02311 145 SUPERFAMILY Actin-like ATPase domain 2 49 IPR043129 -
Cca08g02311 145 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 49 145 IPR029047 -
Cca08g02311 145 PRINTS 70kDa heat shock protein signature 140 145 - -
Cca08g02311 145 PRINTS 70kDa heat shock protein signature 59 78 - -
Cca08g02311 145 PRINTS 70kDa heat shock protein signature 32 52 - -
Cca08g02311 145 PANTHER HEAT SHOCK PROTEIN 70KDA 1 145 IPR013126 GO:0005524|GO:0140662
Cca08g02311 145 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 56 145 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02311 Cca-Chr8 56859892 56860330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02311 1 145 Calmodulin-binding Proteins AT3G12580 75.862 2.80e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02311 K03283 - gmx:121173324 239.965