Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02296 ATGGCAATTAAGAGCATCATTTCTGCAACTTATTTCCTACTCTTTCTCCACCTTCTCCTTCGCTTGGCCTCATGCAGTACCAAAAGGAACCAGGTTTATGTAGTTGAGTTGTTTGGAGAGCACTCTAGTAGTGGAGATCATAAAACACTGCATGAAGTAGAAAATGCCCATCACTCTTTTTTGCTTTCAGTGAAAGAAACTGAGGAGGATGCTCGAGCTTCCCTTCTTTATAGTTACAAACACACTATCAATGGCTTTGCAGCATTGCTTACTCCGAAAGAAGCCAATAAGCTCTCTGAAATGGAGGGGGTGGTCTTTGTGCATAAGAATCAGCCAAGGATCTACTCTTTGCACACCACAAGGTCATGGAAATTCGTGGGGTTAGATGGGCCCTTAAATCCTCAGGAAGAACAATTCAATCACACAAATGAAGACTTGCTAACCAGAGCAAAATATGGGAAAGATATCATTGTAGGAATGATTGATAGTGGTGTGTGGCCAGAGTCAAAGAGCTTCAGTGATGAAGGGATGGACCCTGTTCCGACAAAATGGAAAGGAGTGTGCCAAAATGGAACTGCTTTCGATTCCTCTCAATGCAATAGAAAGATCATTGGAGCTCGTTACTACTTGCATGGGTATGAAAGTATATATGGCCCTCTAAACGAAAAGGAAGATTACAAGTCAGCACGTGACAAAGATGGACACGGAAGCCACACAGCTTCAATAGTGGGAGGGCGTGCAGTTGCGAACGCATCAGCCATGGGGGGCTTTGCGAAGGGGACGGCCCAAGGGGGTGCCCCACTGGGCCGGCTGGCCATATACAAAGCGTGTTGGCCCATTAAGGGGCAGTCAAAGAGCGATGGCAACGTGTGCACAAACATTGACATTCTCAAGGCCATAGATGACGCCATTGGTGACGGCGTTGACGTCATAAGCATTTCCATTGGGTACAGTGCACCGATCTCTTATGAGGAGGATGTGATCGCCAGGGGGGCATTGCATGGTGTGAGGAAGAACGTAGTGGTGGTGTGTAGTGCTGGCAACTCTGGCCCTTCACCTCACACTTTGTCCAACCCTGCACCCTGGATCATCACTGTCGCTGCTAACACTGTTGATCGTTCCTTTCTTGCTACAGTTAAGCTTACCAATGGCACACGCATTCAGGGTCGATCAATTACTCCAGTCCACATGGGAAATAGCCTCTACCCATTGGTTCTAGCTGGAGATGTTGAGCATCCAGGCTTGCCTAGTACAAATTCTGGGTATTGCCTGGACAATACCCTTCAACCCAACAAGGTAAGAGGGAAGATAGTTCTCTGCCTTAGAGGGCAAGGGGAAAGGCTAAAAAAAGGCTTAGAAGTTCAAAGGGCTGGTGGGGTTGGTTTTATCCTTGGCAACAATAAAATAAATGGGAACGATGTACCCTCTGATCCTCATTTTATTCCAGCCGCTGGTGTGTCCTATGAGAATGCCTTAAAACTAATTCACTATGTCAATTCTACTCCAAATCCAATGGCACAAATTCTACCAGGAACAACAGTGTTAAATACCAAACCAGCACCCTCCATGGCCTCCTTTTCTAGCAGGGGTCCAAATATAGTTTACCCCAATATTCTGAAGCCTGACATTACAGCTCCAGGAGTAGACATATTGGCAGCATGGACCGCTGAAGATGGCCCCACACGAATGACATTTTACGACAATCGAGTAGTTAAATACAACATTTTCTCTGGAACTTCAATGTCATGCCCTCACGTGGCTGCTGCGGCAGTTCTTCTCAAAGCCATTCACCCTACTTGGAGCACTGCTGCTATAAGATCTGCTCTCATCACTACAGCCATGGCAACAGACAACACTGGCAATCCATTGACTGATGAAACTGGAAATCCTGCAACGCCTTTCGCAATGGGGTCTGGCCACTTCCACCCCAAAAGAGCAGCAGATCCTGGTCTGGTTTATGATGCCTCCTACATGGACTACCTTCTTTACACTTGTAGCCTTGGAGTGACTCAAAACTTTAACATTACATATAACTGTCCAAAGTCATTTCCTGAACCGTTTGAGCTTAACTATCCATCCATACAAATCCATAGGCTCAATTACACCAAGACTATTAAGAGGACAGTCACCAATGTTGGTAGGAGAAGGAGTGTTTACATGTTTAGTGCTGTGTCACCAAAGGAATACTCCATCACAGCTACTCCAAACATTCTGAAATTTAATCATGTTGGGCAAAAAATGAACTTCGTCATCACAGTGACAGCAAACTGGGGTCAGATACTAACCAAGCATGAGCCAGATAACTACTATTTTGGATGGTATGCATGGACTCGCGAACAACACGTTGTAAGAAGCCCAGTGGCAGTGTCTTTTCCATAA 2379 0.4573 MAIKSIISATYFLLFLHLLLRLASCSTKRNQVYVVELFGEHSSSGDHKTLHEVENAHHSFLLSVKETEEDARASLLYSYKHTINGFAALLTPKEANKLSEMEGVVFVHKNQPRIYSLHTTRSWKFVGLDGPLNPQEEQFNHTNEDLLTRAKYGKDIIVGMIDSGVWPESKSFSDEGMDPVPTKWKGVCQNGTAFDSSQCNRKIIGARYYLHGYESIYGPLNEKEDYKSARDKDGHGSHTASIVGGRAVANASAMGGFAKGTAQGGAPLGRLAIYKACWPIKGQSKSDGNVCTNIDILKAIDDAIGDGVDVISISIGYSAPISYEEDVIARGALHGVRKNVVVVCSAGNSGPSPHTLSNPAPWIITVAANTVDRSFLATVKLTNGTRIQGRSITPVHMGNSLYPLVLAGDVEHPGLPSTNSGYCLDNTLQPNKVRGKIVLCLRGQGERLKKGLEVQRAGGVGFILGNNKINGNDVPSDPHFIPAAGVSYENALKLIHYVNSTPNPMAQILPGTTVLNTKPAPSMASFSSRGPNIVYPNILKPDITAPGVDILAAWTAEDGPTRMTFYDNRVVKYNIFSGTSMSCPHVAAAAVLLKAIHPTWSTAAIRSALITTAMATDNTGNPLTDETGNPATPFAMGSGHFHPKRAADPGLVYDASYMDYLLYTCSLGVTQNFNITYNCPKSFPEPFELNYPSIQIHRLNYTKTIKRTVTNVGRRRSVYMFSAVSPKEYSITATPNILKFNHVGQKMNFVITVTANWGQILTKHEPDNYYFGWYAWTREQHVVRSPVAVSFP 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02296 792 ProSiteProfiles Serine proteases, subtilase domain profile. 122 647 - -
Cca08g02296 792 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 26 789 - -
Cca08g02296 792 Pfam Subtilase family 153 639 IPR000209 GO:0006508|GO:0008236
Cca08g02296 792 Gene3D - 372 515 - -
Cca08g02296 792 ProSitePatterns Serine proteases, subtilase family, serine active site. 578 588 IPR023828 -
Cca08g02296 792 CDD Peptidases_S8_3 115 613 IPR034197 -
Cca08g02296 792 Pfam PA domain 403 494 IPR003137 -
Cca08g02296 792 Pfam Peptidase inhibitor I9 32 113 IPR010259 -
Cca08g02296 792 Gene3D Peptidase S8/S53 domain 155 660 IPR036852 GO:0004252|GO:0006508
Cca08g02296 792 CDD PA_subtilisin_like 378 508 - -
Cca08g02296 792 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Cca08g02296 792 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Cca08g02296 792 PRINTS Subtilisin serine protease family (S8) signature 577 593 IPR015500 -
Cca08g02296 792 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 789 IPR045051 -
Cca08g02296 792 SUPERFAMILY PA domain 430 524 IPR046450 -
Cca08g02296 792 SUPERFAMILY Subtilisin-like 119 651 IPR036852 GO:0004252|GO:0006508
Cca08g02296 792 Pfam Fibronectin type-III domain 688 789 IPR041469 -
Cca08g02296 792 Gene3D - 664 791 - -
Cca08g02296 792 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 118 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02296 Cca-Chr8 56613215 56619010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02296 23 791 Subtilisin-like Serine Gene Family AT5G45650 57.417 0.0 876
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02296 - - gmx:100793064 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02296 08 56613215 56619010 Cca08g02296 08 56613215 56619010 ECH