Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02290 ATGGTCGTCGAAGAAACCCAAAAACCAACCCAAACAGAGGAGCAAAACCCTAGCAGGGTGGCCAacgacgacgacgacgatctcgaggagggagagatcctcgacggtgacgacgacggcgccgccgCCAATTCGAAGCCTCCGTCCGCCCTCCTCCGCAACCCCCACCCTCTGGAGAATTCGTGGACCTTCTGGTTCGACAACCCTTCCGCCAAGTCCAAACAAGCCGCATGGGGAAGCTCCATGCGACCCATCTACACTTTCGCATCCGTCGAGGAGTTTTGGAGCATTTATAATAACATTCACCACCCTAGTAAGTTGGGTGGGGGTGCGGACTTCCATTGCTTCAAGCATAAGATTGAGCCAAAGTGGGAGGACCCTATTTGTGCTAATGGTGGCAAATGGACTATGACCTTCCAAAGGGGGAAATCTGACACCAGTTGGTTGTATACGTTGTTGGCGATGATTGGAGAACAGTTTGATCACGGAGATGAAATTTGCGGAGCCGTTGTGAATGTCAGAAATAGGCAGGATAAAATTGCTCTTTGGACTAAGAATGCTTCCAATGAAGCTGCTCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTACAATGATTCAATTGGCTTTATATTTCATGAGGATGCAAAGAAGCTTGACAGAGCTGCTAAAAGTAAATACGTCATATGA 696 0.4296 MVVEETQKPTQTEEQNPSRVANDDDDDLEEGEILDGDDDGAAANSKPPSALLRNPHPLENSWTFWFDNPSAKSKQAAWGSSMRPIYTFASVEEFWSIYNNIHHPSKLGGGADFHCFKHKIEPKWEDPICANGGKWTMTFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQDKIALWTKNASNEAAQVSIGKQWKEFLDYNDSIGFIFHEDAKKLDRAAKSKYVI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02290 231 SUPERFAMILY eIF4e-like 52 224 IPR023398 -
Cca08g02290 231 MobiDBLite consensus disorder prediction 23 37 - -
Cca08g02290 231 Pfam Eukaryotic initiation factor 4E 57 209 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cca08g02290 231 MobiDBLite consensus disorder prediction 1 53 - -
Cca08g02290 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cca08g02290 231 MobiDBLite consensus disorder prediction 1 17 - -
Cca08g02290 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 231 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cca08g02290 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 231 - -
Cca08g02290 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 49 231 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02290 Cca-Chr8 56549625 56551810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02290 1 230 Eukaryotic Initiation Factors Gene Family AT4G18040 65.417 4.32e-114 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02290 K03259 - gmx:100793288 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02290 08 56549625 56551810 Cca08g02290 08 56549625 56551810 ECH