Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02283 ATGCTGACAGAGAAAAGGGAGAGAACACTAGAAATGGCAAAGCTTAGTTCAACTTACGCTACTTCTGATTTCGTTTATCATGGACTTGTACTTCCCTTTCTGTTGCTATCATCTTTCTCCTTTCAACTTGCATCCTGTGGTTCCATAGTTAAGTTCCTTCCTGGATTCGAGGGGCCCCTTCCTTTTCTTCTTGAAACCGGGTATGTGGGAGTGGGAGAATCAGATGATGTGCAAACCTTCTACTACTTCATTGAGTCAGAGAACAATCCAAAGGAGGATCCTCTCATGCTTTGGCTCACTGGCGGTCCTGGTTGCTCAGCCTTGTCTGGCCTTGTCTTTGAAATAGGTCCCCTAGCATTCAAATATGAGGAATACAATGGAAGCCTGCCCAATTTGGTCTTGAGACCACACTCATGGACAAAGGTTAGTAGCATTATATTTGTAGACTTGCCTGTTTCCACGGGCTTCACTTATGCCACAACAGAGTCTGCTTCTCAACGAAGTGACTGGATGCTGGTTCACCATGTCCATCAATTTCTTAGGAAGTGGTTGATTGATCATCCAAATTTTTTGTCAAATCAAGTTTACATTGGTGGCGATTCATACTCTGGTATTCCTATTCCAGTGATTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGGTCCAACCATGGATAAATCTCCGGGGGTACCTGCTGGGGAATGCAGCAACAACTAGAAAGGAAAAAAACTATAAAATCCCCTTTGCTCATGGTATGGGACTAATTTCTGATGAACTATACGAGTCACTGCAAAAAAATTGCAAAGGGGAGTACATAAATGTAGACACCAGAAACCTATTATGTTATAGAGATATGGAGTCATTCGATAAAGCAACATCAGGACTAAATCATGCATATATTTTAGACCCATCATGCGAGTGGCTTGATACTGAAACATCATGGAGGAGATCTCTAATTAAGAAATATCCCGGGAAGAAGCTCTTAAATACTCTTCTCAAATTGCCACTCTTAAGCTGTCGGAGTTATGTATACTTCCTCTGCGGTTATTGGGCCAACGATGATAATGTTCGCAATGCACTGCATATCCGTAAGGGAAGTATAGGAAAATGGCATCGCTGTAACATTAATATACCATTCAAGAATGATATCTCAAGCAGCTATGATTATCACGTAAATCTCAGTAAAAAAGGTTATCGTTCACTCATATACAGTGGCGATCATGACATGGAAATTCCTTTCTTGGCAACTCAAGCATGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCAGTGGCAAACAAATGGCCAAGTTGCGGGATACACAAGGACTTATTCCAATCGCATGACATTTGCAACTGTGAAGGGAGGAGGGCACACAGCTCCGGAGTACAAGCCTGAAGAATGCTTTGCAATGTACAGTAGATGGATATCTAACACACCTTTGTAG 1458 0.4163 MLTEKRERTLEMAKLSSTYATSDFVYHGLVLPFLLLSSFSFQLASCGSIVKFLPGFEGPLPFLLETGYVGVGESDDVQTFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFKYEEYNGSLPNLVLRPHSWTKVSSIIFVDLPVSTGFTYATTESASQRSDWMLVHHVHQFLRKWLIDHPNFLSNQVYIGGDSYSGIPIPVIVQEISQGNEKGVQPWINLRGYLLGNAATTRKEKNYKIPFAHGMGLISDELYESLQKNCKGEYINVDTRNLLCYRDMESFDKATSGLNHAYILDPSCEWLDTETSWRRSLIKKYPGKKLLNTLLKLPLLSCRSYVYFLCGYWANDDNVRNALHIRKGSIGKWHRCNINIPFKNDISSSYDYHVNLSKKGYRSLIYSGDHDMEIPFLATQAWIRSLNYSIVDDWRQWQTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECFAMYSRWISNTPL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02283 485 SUPERFAMILY alpha/beta-Hydrolases 50 484 IPR029058 -
Cca08g02283 485 Gene3D - 344 485 - -
Cca08g02283 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 483 IPR001563 GO:0004185|GO:0006508
Cca08g02283 485 Gene3D alpha/beta hydrolase 46 316 IPR029058 -
Cca08g02283 485 Pfam Serine carboxypeptidase 54 482 IPR001563 GO:0004185|GO:0006508
Cca08g02283 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Cca08g02283 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Cca08g02283 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Cca08g02283 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Cca08g02283 485 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 26 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02283 Cca-Chr8 56451047 56455918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02283 44 73 Calmodulin-binding Proteins AT2G22960 76.667 3.63e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02283 K16296 - gmx:100792006 834.713