Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02279 ATGAGGTTGCACTTCTCTTGCGTTTTACAATTTACATCACATTTGGTTCCGCCTCTGCTCTCTGTCACCGCCGTGCATCTTGTAACCATGCCTAAGCAAATCCACGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCGGTGAAGATTAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTGCGATGCTCCAAGTACCTCTACACACTTTGTGTGTTTGACCCTGAGAAAGCTGATAAATTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTGA 297 0.4579 MRLHFSCVLQFTSHLVPPLLSVTAVHLVTMPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02279 98 Gene3D - 30 98 IPR038464 -
Cca08g02279 98 PANTHER 60S RIBOSOMAL PROTEIN L38 30 98 - -
Cca08g02279 98 PANTHER 60S RIBOSOMAL PROTEIN L38 30 98 IPR002675 GO:0003735|GO:0005840|GO:0006412
Cca08g02279 98 Pfam Ribosomal L38e protein family 31 97 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02279 Cca-Chr8 56426842 56428182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02279 30 98 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 1.47e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02279 K02923 - gmx:100787764 140.584