Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02263 ATGTTAATGGATAGCAGTGGTCGGGACTCGGGGATGAGTTCAGAGACGCAACGAACTTCAATCAGCAACGAAAGCGTGTGCAGCACCAGCTTCAGCTTCAGCTTCAGCCGCCTCTCCTTCGACCTCCCTCCCTCCACCTCCTCGCCGGAGAGCCTCCTCGTCAAGCCCCACCGCTCCTCCGACTTCGCCTACTCCGCCATCTTCAGGCGGAGGTCGGCGCTTACGTTCCGTGACTTCCACCTGCTCCGGCGCATCGGCGCGGGGGACATCGGGACGGTGTACCTGTGCCGGCTGCGGTCCGAGGAGGAGGAGGAATTGGTGTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCGCTGAAGAAGAAGGCGCAGAGGGCGGAGATGGAGAGAAAGATTCTGAAGATGGTGGACCATCCTTTCCTCCCTACCCTCTATGCGGAGTTCGAGGCATCGCATTTCTCTTGCATTGTCATGGAGTATTGTTGCGGTGGGGACTTGCACTCCCTTCGACACACCCACCCTAACAACCGCTTCCCTCTCTCATCTGCTAGGTTTTACGCGGCTGAAGTACTGGTGGCGTTGGAGTATCTCCACATGCTGGGAATCATCTACAGAGATCTAAAGCCGGAAAACGTGTTAGTGAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCCCTATGCTCGGATGCAATCCCGGCCGTGGAATCCCCTGAGTGCTTCCCACGTGCGTTACCCTCCACCCCCTTCTCCTGCCTCTCCAACCGCGTCTTCCGCTCCCGGAAGCTCCACAGCCTTCAACCGAAGCGTCTGTTCGTGGCGGAGCCGGTGGGGGCCCGCTCCAGCTCCTTCGTGGGGACGCACGAGTACGTGTCGCCGGAGGTGGCCTCCGGGAACTCCCACGGCAACGCCGTCGACTGGTGGTCCTTGGGGATATTCATGTACGAGATGCTGTACGGTCGCACACCCTTCGTGGGTCCATCGAACGAGGCCACGCTGCGCAACATCATTAAAAAGCCCCTCGCCTTTCCCACCGCCACGCCCTCCGGTGCGCTTGAAATGCACGCGCAGGACCTCATCTCAGCCTTGCTCCAGAAGGACCCCAACCGCAGGCTTGGCTCGAAGCGAGGCGCCGCCGACGTCAAGAACCACCCTTTCTTCGCCGGACTCAACTTGGCTCTCATACGCATGCTGACGCCGCCCGACCTTCCCTCCCTCAGACGCCACAAAACCACCCCCGCTAACGATAACACTAGGTTAACGCCCTTTGATTACTTCTGA 1290 0.5946 MLMDSSGRDSGMSSETQRTSISNESVCSTSFSFSFSRLSFDLPPSTSSPESLLVKPHRSSDFAYSAIFRRRSALTFRDFHLLRRIGAGDIGTVYLCRLRSEEEEELVYAMKVVDKEAVALKKKAQRAEMERKILKMVDHPFLPTLYAEFEASHFSCIVMEYCCGGDLHSLRHTHPNNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESPECFPRALPSTPFSCLSNRVFRSRKLHSLQPKRLFVAEPVGARSSSFVGTHEYVSPEVASGNSHGNAVDWWSLGIFMYEMLYGRTPFVGPSNEATLRNIIKKPLAFPTATPSGALEMHAQDLISALLQKDPNRRLGSKRGAADVKNHPFFAGLNLALIRMLTPPDLPSLRRHKTTPANDNTRLTPFDYF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02263 429 Gene3D Phosphorylase Kinase; domain 1 77 161 - -
Cca08g02263 429 PANTHER FLIPPASE KINASE 1-RELATED 3 415 - -
Cca08g02263 429 Gene3D Transferase(Phosphotransferase) domain 1 162 229 - -
Cca08g02263 429 MobiDBLite consensus disorder prediction 7 21 - -
Cca08g02263 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Cca08g02263 429 ProSiteProfiles Protein kinase domain profile. 79 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02263 429 MobiDBLite consensus disorder prediction 408 429 - -
Cca08g02263 429 SMART serkin_6 79 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02263 429 CDD STKc_phototropin_like 77 411 - -
Cca08g02263 429 Gene3D Transferase(Phosphotransferase) domain 1 283 408 - -
Cca08g02263 429 MobiDBLite consensus disorder prediction 1 21 - -
Cca08g02263 429 Pfam Protein kinase domain 79 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02263 429 Pfam Protein kinase domain 284 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02263 429 Coils Coil 110 130 - -
Cca08g02263 429 SUPERFAMILY Protein kinase-like (PK-like) 61 409 IPR011009 -
Cca08g02263 429 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02263 Cca-Chr8 56275273 56277488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02263 1 429 AGC Kinase Gene Family AT2G34650 66.143 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Cca08g02263 Pkinase 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02263 - - ccaj:109816415 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02263 08 56275273 56277488 Cca08g02263 08 56275273 56277488 ECH