Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02234 ATGAGATTAAAGGGGCGTGATGATTTTGGCTTTGAATATCCAAGTACAGATTCTGGATTGGTTCCACGTGAACTGCTTCAAGGAGTAGAAGAGCTGCTCAAAATTTCTGCTGAAAAATTTGGCGGCTTCGACCTCACAAAAGTAATTAACACACAGAATGCAGAGATAGATGACATAAATATCATCCGAGATGGAGATCAAGTGCTCTTGGTCAGTGTAAAAGATGCTAGAGTGACTTCAAAGAAGCATCTCACTTTGGTGTGCTTCTGTGTTGAAAACAAATTTATCCCGATGAATAAGAGAGCTGTCTGCAAAAAGCAAGTACAAATACTTGAGAGTTTCTCTTAG 348 0.3937 MRLKGRDDFGFEYPSTDSGLVPRELLQGVEELLKISAEKFGGFDLTKVINTQNAEIDDINIIRDGDQVLLVSVKDARVTSKKHLTLVCFCVENKFIPMNKRAVCKKQVQILESFS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02234 115 PANTHER POTASSIUM CHANNEL AKT1 29 76 IPR045319 GO:0005249|GO:0006813
Cca08g02234 115 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 29 76 - -
Cca08g02234 115 PANTHER POTASSIUM CHANNEL AKT1 1 28 IPR045319 GO:0005249|GO:0006813
Cca08g02234 115 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 28 - -
Cca08g02234 115 Pfam KHA, dimerisation domain of potassium ion channel 28 69 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02234 Cca-Chr8 55823342 55825030 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02234 25 72 Ion Channels AT5G46240 50.000 2.71e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02234 K21867 - gmx:100783528 67.0106