Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g02154 ATGCTTCCTGATCAGAGAAAAAAGTCATCTGTGGATGTGGACTTCTTTACTGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGCGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTAGAGATCAAACATATTCTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTCGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCTAATGATGATCTGACACCAGAGCATTACCAGTTTTTCCTGTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTCTTTCACCGTGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATATGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACCCCCACTGCTATTTTCTGGACAGATTATGTTGCAACAAGATGGTACAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCGGCTATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTGTTGACTGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCACCAACTAGACCTTATGACAGATTTTCTTGGAACTCCATCTCCTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATATTTGAGCAGCATGCGTAAGAAGAAACCAGTTCCTTTCTCGCATAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCTAAGGATCGGCCAACTGCTGAAGAGGCTCTAGCGGATCCATATTTTAAAGGTTTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGGCGAATAACAAAGGAAGATGTACGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCGAAGATGTTGAAGGAATTTCTAGAGGGAGCAGAGCCTACAGGTTTCATGTATCCAAGTGCTGTGGATCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAAGGGGGAACTGTTGCTCCACCTGAGAGGCAACATGCATCATTACCCAGACCTTGTGTATTGTATTCAGACAACTCAATGCAGAATACCTCAGAGGTTGCAGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCGTAGATAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTGCAAGCACCTCAAAATATTCAAGGTGTTGCTGCAAGACCCGGAAAGGTTGTTGGTTCGGTAATGCGTTACAACAACTGTGGGGTAGCAGTGACGGCAGAGGCTGAACAACGAAGGGCAGTCAGGAATCCATCTGTTTCAGCTCAGTACGCTGCGTCAAGCTGTTCGTATCCCAGGAGAAACCCAGGCTATAAAAATGAGAGGGCAGAGGATGACGGGATTGAAGGTTCAAATGGGCTGCAGCCAAAGCCATACATGGCGAGAAAAGTGGCTGCTGCTCAAGGTGGAGCTGGTGGTCAGTGGTATTGA 1686 0.4353 MLPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSHKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSMQNTSEVADDLSKCCIKEVEKQPVDRSSAIPMSRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAEAEQRRAVRNPSVSAQYAASSCSYPRRNPGYKNERAEDDGIEGSNGLQPKPYMARKVAAAQGGAGGQWY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g02154 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cca08g02154 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02154 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Cca08g02154 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Cca08g02154 561 MobiDBLite consensus disorder prediction 516 541 - -
Cca08g02154 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02154 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Cca08g02154 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cca08g02154 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g02154 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Cca08g02154 561 CDD STKc_TDY_MAPK 24 361 - -
Cca08g02154 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g02154 Cca-Chr8 54794852 54802098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g02154 1 561 MAP Kinase Gene Family AT5G19010 80.662 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Cca08g02154 Pkinase 8.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g02154 - K04371 gmx:100781957 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g02154 08 54794852 54802098 Cca08g02154 08 54794852 54802098 ECH
Cca11g02858 11 55943390 55950496 Cca08g02154 08 54794852 54802098 PCT