Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca08g02032 | ATGGCGGGGTCATGTTTCCTCGGGCTTAGGCTAAGGAGGTCTAAGAGTAAGCCTTTACCAGAACCTTCATCTGCCTCCAAGACCCATTTGGAGATTGACGTGGATAACATGGGAAGGAAGAGATTTGATAGCATGGAATCGTGGTCCATGATATTGGACTCAATGGAGACATGGGAGGCTTCAAAGGAGGAGGAGCAAGAGGAATGGACTGCAGACTTGTCACAGCTGTTTATAGGTAACAAGTTTGCTTCCGGGGCTCATAGCCGAATCTACCGTGGAATCTACAAGCAGATAGCTGTTGCTGTGAAAATGGTGAGGATTCCATCAGAGGATGAGGAGAGAAAGGCCTTGCTAGAAATGCAATTTAACTCTGAAGTGGCTTTGCTTTCACGTCTCTTTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAGAAACCGCCCGTGTATTGTATCATAACAGAATACATGTCACAAGGGACCCTGAGGATGTATCTGAATAAGAAAGAGCCATACTCACTCTCAATGGAAACAATTCTAAGGTTAGCTCTAGATATATCAAGGGGTATGGAGTACCTTCATTCACAAGGAGTTATTCACAGAGACCTGAAGTCAAGTAATTTGCTTCTCAACGATGATATGAGGGTCAAGGTGGCGGATTTTGGCACTTCTTGTCTTGAAACACGATGTCGGAAAAGCAAAGGGAATTCTGGAACATATCGTTGGATGGCACCAGAGATGGTTAAGGAAAAACCTTATACTCGTAAAGTTGATGTGTATAGTTTTGGTATTGTGCTTTGGGAGCTCACAACTGCTCTACTTCCATTCCAAGGGATGACCCCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTGAACCAGCACTAGCACATCTGATAAAGCGTTGCTGGTCAGCAAACCCCTCGAAAAGGCCAGATTTCAGTGATATTGTGTGCACTTTGGAGAAGTACGATGAGTGTATGAAAAAGGGCCTACCACTAAGTCATCATTCAGGGCTACTCAGCAGAAATGTAATTATTCAACGCCTAAAAGGCTGTGTGTCCGAGAGCTCTTCCATAACTGTACATGCTTGA | 1122 | 0.4456 | MAGSCFLGLRLRRSKSKPLPEPSSASKTHLEIDVDNMGRKRFDSMESWSMILDSMETWEASKEEEQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQIAVAVKMVRIPSEDEERKALLEMQFNSEVALLSRLFHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSMETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLNDDMRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMVKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCEPALAHLIKRCWSANPSKRPDFSDIVCTLEKYDECMKKGLPLSHHSGLLSRNVIIQRLKGCVSESSSITVHA | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca08g02032 | 373 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 158 | - | - | |
Cca08g02032 | 373 | SMART | serkin_6 | 76 | 337 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca08g02032 | 373 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 198 | 210 | IPR008271 | GO:0004672|GO:0006468 | |
Cca08g02032 | 373 | CDD | STKc_MAP3K-like | 83 | 327 | - | - | |
Cca08g02032 | 373 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 350 | - | - | |
Cca08g02032 | 373 | ProSiteProfiles | Protein kinase domain profile. | 76 | 349 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca08g02032 | 373 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 9 | 361 | - | - | |
Cca08g02032 | 373 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 | 9 | 361 | - | - | |
Cca08g02032 | 373 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 330 | IPR011009 | - | |
Cca08g02032 | 373 | Pfam | Protein tyrosine and serine/threonine kinase | 78 | 329 | IPR001245 | GO:0004672|GO:0006468 | |
Cca08g02032 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 154 | 167 | IPR001245 | GO:0004672|GO:0006468 | |
Cca08g02032 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 192 | 210 | IPR001245 | GO:0004672|GO:0006468 | |
Cca08g02032 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 248 | IPR001245 | GO:0004672|GO:0006468 | |
Cca08g02032 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672|GO:0006468 | |
Cca08g02032 | 373 | PRINTS | Tyrosine kinase catalytic domain signature | 301 | 323 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca08g02032 | Cca-Chr8 | 53213605 | 53219957 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca08g02032 | 1 | 364 | MAP Kinase Kinase Kinase | AT1G62400 | 79.255 | 0.0 | 602 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Cca08g02032 | PK_Tyr_Ser-Thr | 8.8e-67 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca08g02032 | - | - | aprc:113845847 | 652.129 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca11g02957 | 11 | 56861746 | 56866553 | Cca08g02032 | 08 | 53213605 | 53219957 | PCT |