Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01996 ATGCGAGCTAAGGTCAGAGCGAACGCCGCTAGATTGGGACACGCGAATGAGAATAGCATTGGGAGCCGCACGAGGCCTGGCGTTCCTCCACGTGTCAGCCAAACAGGTCCACGGCAACATCAAATCCTCCAACATCCTCCTCCACCCGAACCACGACCTCTGCGTTTCGGACTTCGGGCTGAACCGATATTCGCGAACCCGGTTCCCTCGAACCGGGTGGCAGGTTACCGGGCTCCGGAGGTTCTGGAAACCCGAAAGGTGACATTGAAATCCGACGTGTACAGCTTCGGCGTGCTGGTGCTGGAGCTCCTAACGGGCAAGGCGCCGAACCAAGCCTCGCTGAGCGAGAAAGGGATCGACCTTCCACGTTGGGTGCAGTCAGTGGTGCGCGAAGAGTGGACCGCGAAAGTGATCGACGCGGAACTCATGAGGTTCCAGAACATCGAAGAGGAGATGGTTCAGTTGTTGCAGATTGCCATGTCCTGCGTTGCGCTTGTGCTCGACCAGAGGCCCAACATGGATGAGGTGGTGCGCATGATTGGGGATATTGTTAGCCTCCCAATGGAATAG 570 0.5754 MRAKVRANAARLGHANENSIGSRTRPGVPPRVSQTGPRQHQILQHPPPPEPRPLRFGLRAEPIFANPVPSNRVAGYRAPEVLETRKVTLKSDVYSFGVLVLELLTGKAPNQASLSEKGIDLPRWVQSVVREEWTAKVIDAELMRFQNIEEEMVQLLQIAMSCVALVLDQRPNMDEVVRMIGDIVSLPME 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01996 189 Gene3D Transferase(Phosphotransferase) domain 1 61 186 - -
Cca08g01996 189 MobiDBLite consensus disorder prediction 1 52 - -
Cca08g01996 189 Pfam Protein tyrosine and serine/threonine kinase 76 179 IPR001245 GO:0004672|GO:0006468
Cca08g01996 189 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g01996 189 PANTHER OS05G0588300 PROTEIN 61 183 - -
Cca08g01996 189 SUPERFAMILY Protein kinase-like (PK-like) 75 179 IPR011009 -
Cca08g01996 189 PANTHER RECEPTOR-LIKE KINASE 61 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01996 Cca-Chr8 52757444 52758136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01996 56 183 Receptor kinase-like Gene Family AT5G58300 68.750 1.84e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Cca08g01996 PK_Tyr_Ser-Thr 8.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01996 - - gmx:100784259 216.853