Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g01929 ATGGCTAACCGAAACCCTAACTCTGATGAGGTGGTGTGCGTAACAGGCGCCAACGGCTTCATCGGTTCATGGCTCGTCCGAACCCTCTTGGAGAGCACTAACCCACGCTACGCCATCCACGCCGCCATCTTCCCCGGCTCCGACTTCTCCCACCTCTTCTCCCTCCGCCCGGACGCCTCCTCCCGCCTCACCGTCTTCCACGCCGACCTCCTCGACCTCGCCGCCCTCTCCCTTGCCGTCGCCGGCTGCTCCGGCGTCTTCCACGTGGCCTCCCCCTGCACGCTCGACGACCCCGCCGACCCGCACAAGGACCTCCTCGAGCCCGCCGTGCGCGGAACCCTAAACGTCCTCGAGGCGGCGCGGCGCTCGGGCGTGCGGCGCGTGGTGCTCACTTCCTCGATCTCCGCGATGGTGCCGAACCCCGGGTGGCCGGCGGGAAGGCCGCCGGACGAGGCGTCGTGGACGGACGTGGAGTACTGCCGGGCGCGCGGGAAGTGGTACCCGGTGGCGAAGACGGAGGCGGAGCGGGCGGCGTGGGGGTTCGAGGGCGTGGAGGTGGTGGCGGTGCTGCCGGCGACGTGTCTGGGCCCGCTGCTGCAGGCGGGGCTGAACGCGAGCTCCGTTGTGCTGCAGAGGCTGATGATGGGGTCGAGGGAGACGCAGGAGTATCACTGGCTGGGCGTGGTGCATGTTAGGGACGTTGCCAAGGCTCATCTGTTGCTCTATCAATCGCCAACTGCTTCTGTTTCCCAGAAGAAACACAACCTGGTCTGA 774 0.6757 MANRNPNSDEVVCVTGANGFIGSWLVRTLLESTNPRYAIHAAIFPGSDFSHLFSLRPDASSRLTVFHADLLDLAALSLAVAGCSGVFHVASPCTLDDPADPHKDLLEPAVRGTLNVLEAARRSGVRRVVLTSSISAMVPNPGWPAGRPPDEASWTDVEYCRARGKWYPVAKTEAERAAWGFEGVEVVAVLPATCLGPLLQAGLNASSVVLQRLMMGSRETQEYHWLGVVHVRDVAKAHLLLYQSPTASVSQKKHNLV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g01929 257 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 247 - -
Cca08g01929 257 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 247 IPR036291 -
Cca08g01929 257 Gene3D - 3 254 - -
Cca08g01929 257 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 10 247 - -
Cca08g01929 257 Pfam NAD dependent epimerase/dehydratase family 12 252 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g01929 Cca-Chr8 52012172 52015173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g01929 8 248 Monolignol Biosynthesis Gene Families AT2G02400 61.475 1.06e-111 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g01929 - - gmx:100795399 411.764